RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 NLRP9Q7RTR0 991 aa17.08■□□□□ 0.33
DDX41-201ENST00000330503 BBS7Q8IWZ6 715 aa17.08■□□□□ 0.33
DDX41-201ENST00000330503 PNPLA1Q8N8W4 532 aa17.08■□□□□ 0.33
DDX41-201ENST00000330503 ZNF398Q8TD17 642 aa17.08■□□□□ 0.33
DDX41-201ENST00000330503 POF1BQ8WVV4 589 aa17.08■□□□□ 0.33
DDX41-201ENST00000330503 HDAC10Q969S8 669 aa17.08■□□□□ 0.33
DDX41-201ENST00000330503 C7orf26Q96N11 449 aa17.08■□□□□ 0.33
DDX41-201ENST00000330503 DNMT3BQ9UBC3 853 aaKnown RBP17.08■□□□□ 0.33
DDX41-201ENST00000330503 DCTN4Q9UJW0 460 aa17.08■□□□□ 0.33
DDX41-201ENST00000330503 SLC12A4Q9UP95 1085 aa17.08■□□□□ 0.33
DDX41-201ENST00000330503 TRAV19A0A0A6YYK7 116 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 SLC7A4O43246 635 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 PIRTP0C851 137 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 SAT1P21673 171 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 CDC25CP30307 473 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 CSKP41240 450 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 MAGEA9P43362 315 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 POLD2P49005 469 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 CLCN4P51793 760 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 ACVR1Q04771 509 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 STX3Q13277 289 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 CNSTQ6PJW8 725 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 CEP97Q8IW35 865 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 C10orf67Q8IYJ2 551 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 ELMOD1Q8N336 334 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 PHOSPHO2Q8TCD6 241 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 BRSK1Q8TDC3 778 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 BLOC1S5Q8TDH9 187 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 BHMTQ93088 406 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 NUDCD1Q96RS6 583 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 TRIM55Q9BYV6 548 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 SCUBE2Q9NQ36 999 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 FBXO6Q9NRD1 293 aaPredicted RBP17.08■□□□□ 0.32
DDX41-201ENST00000330503 ARL5AQ9Y689 179 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 DOCK6Q96HP0 2047 aa17.08■□□□□ 0.32
DDX41-201ENST00000330503 LAMA2P24043 3122 aaKnown RBP17.07■□□□□ 0.32
DDX41-201ENST00000330503 FAM95CA0A1B0GW59 222 aa17.07■□□□□ 0.32
DDX41-201ENST00000330503 HGSO14964 777 aaPredicted RBP17.07■□□□□ 0.32
DDX41-201ENST00000330503 PHGDHO43175 533 aaKnown RBP17.07■□□□□ 0.32
DDX41-201ENST00000330503 TMCC1O94876 653 aa17.07■□□□□ 0.32
DDX41-201ENST00000330503 DLDP09622 509 aaKnown RBP17.07■□□□□ 0.32
DDX41-201ENST00000330503 SLC35E2BP0CK96 405 aa17.07■□□□□ 0.32
DDX41-201ENST00000330503 CD151P48509 253 aa17.07■□□□□ 0.32
DDX41-201ENST00000330503 CCDC15Q0P6D6 951 aa17.07■□□□□ 0.32
DDX41-201ENST00000330503 CCDC153Q494R4 210 aa17.07■□□□□ 0.32
DDX41-201ENST00000330503 KIAA0408Q6ZU52 694 aa17.07■□□□□ 0.32
DDX41-201ENST00000330503 C10orf107Q8IVU9 208 aa17.07■□□□□ 0.32
DDX41-201ENST00000330503 C7orf61Q8IZ16 206 aa17.07■□□□□ 0.32
DDX41-201ENST00000330503 TNS4Q8IZW8 715 aa17.07■□□□□ 0.32
DDX41-201ENST00000330503 C17orf80Q9BSJ5 609 aa17.07■□□□□ 0.32
DDX41-201ENST00000330503 SMG9Q9H0W8 520 aaKnown RBP17.07■□□□□ 0.32
DDX41-201ENST00000330503 MFSD1Q9H3U5 465 aa17.07■□□□□ 0.32
DDX41-201ENST00000330503 COPG2Q9UBF2 871 aa17.07■□□□□ 0.32
DDX41-201ENST00000330503 LHX3Q9UBR4 397 aa17.07■□□□□ 0.32
DDX41-201ENST00000330503 LSM7Q9UK45 103 aaKnown RBP17.07■□□□□ 0.32
DDX41-201ENST00000330503 CLEC4EQ9ULY5 219 aa17.07■□□□□ 0.32
DDX41-201ENST00000330503 OR51F1A6NGY5 319 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 LEFTY2O00292 366 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 BUD23O43709 281 aaKnown RBP17.06■□□□□ 0.32
DDX41-201ENST00000330503 HSPA1AP0DMV8 641 aaKnown RBP17.06■□□□□ 0.32
DDX41-201ENST00000330503 HSPA1BP0DMV9 641 aaKnown RBP17.06■□□□□ 0.32
DDX41-201ENST00000330503 CES1P23141 567 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 AVPR1AP37288 418 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 LEPRP48357 1165 aaKnown RBP17.06■□□□□ 0.32
DDX41-201ENST00000330503 BNIP1Q12981 228 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 PPM1LQ5SGD2 360 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 ATG14Q6ZNE5 492 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 PTAR1Q7Z6K3 402 aaPredicted RBP17.06■□□□□ 0.32
DDX41-201ENST00000330503 CPXM2Q8N436 756 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 TMEM151AQ8N4L1 468 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 TDRD5Q8NAT2 981 aaKnown RBP17.06■□□□□ 0.32
DDX41-201ENST00000330503 SHKBP1Q8TBC3 707 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 TBATAQ96M53 351 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 MYLK2Q9H1R3 596 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 SUDS3Q9H7L9 328 aaPredicted RBP17.06■□□□□ 0.32
DDX41-201ENST00000330503 ASAH2Q9NR71 780 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.06■□□□□ 0.32
DDX41-201ENST00000330503 MARCH4Q9P2E8 410 aaPredicted RBP17.06■□□□□ 0.32
DDX41-201ENST00000330503 VPS51Q9UID3 782 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 VPS28Q9UK41 221 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 ANKRD6Q9Y2G4 727 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 ZNF510Q9Y2H8 683 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 SPO11Q9Y5K1 396 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 NUMBLQ9Y6R0 609 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 MTCL1Q9Y4B5 1905 aaKnown RBP17.06■□□□□ 0.32
DDX41-201ENST00000330503 LINC01553A4QN01 128 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 G3V2L1 256 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 ITM2AO43736 263 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 MOSPD3O75425 235 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 RFPL2O75678 378 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 ARHGEF15O94989 841 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 MT-CO1P00395 513 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 PDHA1P08559 390 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 CPA3P15088 417 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 SYN1P17600 705 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 TAS2R39P59534 338 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 CAMK1Q14012 370 aa17.06■□□□□ 0.32
DDX41-201ENST00000330503 HSF5Q4G112 596 aaPredicted RBP17.06■□□□□ 0.32
DDX41-201ENST00000330503 INO80DQ53TQ3 878 aaPredicted RBP17.06■□□□□ 0.32
DDX41-201ENST00000330503 RAPH1Q70E73 1250 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms