RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 PGLSO95336 258 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 ABHD2P08910 425 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 ALADP13716 330 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 PRKCHP24723 683 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 GKP32189 559 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 IL12RB1P42701 662 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 KIR2DL1P43626 348 aaPredicted RBP10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 GRSF1Q12849 480 aaKnown RBP eCLIP10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 GALNT3Q14435 633 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 KYNUQ16719 465 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 HP1BP3Q5SSJ5 553 aaPredicted RBP10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 IER5LQ5T953 404 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 ARMC12Q5T9G4 340 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 CAMK1DQ8IU85 385 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 CCNJLQ8IV13 435 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 CHST14Q8NCH0 376 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 LPCAT1Q8NF37 534 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 ZNF641Q96N77 438 aaPredicted RBP10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 NAT9Q9BTE0 207 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 ZNF446Q9NWS9 450 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 SAMD15Q9P1V8 674 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 MAD1L1Q9Y6D9 718 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 WASF2Q9Y6W5 498 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 CKAP5Q14008 2032 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 SPAG6O75602 509 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 EGFP01133 1207 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 GSTA2P09210 222 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 HLA-EP13747 358 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 TPH1P17752 444 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 PGAM1P18669 254 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 CRADDP78560 199 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 MLF2Q15773 248 aaPredicted RBP10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 SLC44A4Q53GD3 710 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 UBAP2Q5T6F2 1119 aaKnown RBP10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 STEAP4Q687X5 459 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 DENND2CQ68D51 928 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 CASC4Q6P4E1 433 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 TPRG1Q6ZUI0 275 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 ZNF366Q8N895 744 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 ZNF513Q8N8E2 541 aaPredicted RBP10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 KCNV2Q8TDN2 545 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 PTCD2Q8WV60 388 aaKnown RBP10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 ECHDC3Q96DC8 303 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 LRIG1Q96JA1 1093 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 RANBP9Q96S59 729 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 OSBPL1AQ9BXW6 950 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 FUT8Q9BYC5 575 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 MTG2Q9H4K7 406 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 MRM3Q9HC36 420 aaKnown RBP10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 ZC3H7BQ9UGR2 993 aaKnown RBP10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 IL36AQ9UHA7 158 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 SORCS3Q9UPU3 1222 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 SHISA7A6NL88 538 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 ACSL3O95573 720 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 PDHA1P08559 390 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 GRIA4P48058 902 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 MSLNQ13421 630 aaPredicted RBP10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 QPCTQ16769 361 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 PCID2Q5JVF3 399 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 C9orf64Q5T6V5 341 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 GDPD4Q6W3E5 623 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 PPHLN1Q8NEY8 458 aaKnown RBP10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 PDCD6IPQ8WUM4 868 aaKnown RBP10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 OR8D1Q8WZ84 308 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 SPOCK2Q92563 424 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 RMDN1Q96DB5 314 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 CFAP36Q96G28 342 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 ACOX2Q99424 681 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 SUV39H2Q9H5I1 410 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 LRRC4CQ9HCJ2 640 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 CACNA2D2Q9NY47 1150 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 SUN2Q9UH99 717 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 SOX13Q9UN79 622 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 TCAF1Q9Y4C2 921 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 PCDHB9Q9Y5E1 797 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 STON1Q9Y6Q2 735 aa10.32□□□□□ -0.76
VIPAS39-201ENST00000327028 PRUNE2Q8WUY3 3088 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 A0A1W2PQ67 120 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 TSPAN11A1L157 253 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 MAGEB16A2A368 324 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 ANTXRLA6NF34 631 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 MAN2B1O00754 1011 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 SIN3BO75182 1162 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 CTSLP07711 333 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 NUDT17P0C025 328 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 ADRA1DP25100 572 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 SEC13P55735 322 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 GPX6P59796 221 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 ELAVL3Q14576 367 aaKnown RBP10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 POU6F1Q14863 301 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 CFAP58Q5T655 872 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 EMC10Q5UCC4 262 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 UNC5AQ6ZN44 842 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 PALM2Q8IXS6 379 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 GRIN3AQ8TCU5 1115 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 FAM3CQ92520 227 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 KIFC1Q9BW19 673 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 ZMYND15Q9H091 742 aa10.31□□□□□ -0.76
VIPAS39-201ENST00000327028 VIPAS39Q9H9C1 493 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms