RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 CASP10Q92851 521 aa13.51□□□□□ -0.25
PCDHB9-201ENST00000316105 PSMG2Q969U7 264 aa13.51□□□□□ -0.25
PCDHB9-201ENST00000316105 TM6SF2Q9BZW4 377 aa13.51□□□□□ -0.25
PCDHB9-201ENST00000316105 PIF1Q9H611 641 aa13.51□□□□□ -0.25
PCDHB9-201ENST00000316105 A8MX80 341 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 CFAP99D6REC4 459 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 KATNA1O75449 491 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 HNRNPCP07910 306 aaKnown RBP eCLIP13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 FAM163BP0C2L3 166 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 COL6A2P12110 1019 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 HLA-DPA1P20036 260 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 HTR7P34969 479 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 HCAR3P49019 387 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 IDH3AP50213 366 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 TAS2R39P59534 338 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 SYTL3Q4VX76 610 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 THEMIS2Q5TEJ8 643 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 DDX53Q86TM3 631 aaKnown RBP13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 CLEC4FQ8N1N0 589 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 RP9Q8TA86 221 aaKnown RBP13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 STAG3L4Q8TBR4 150 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 UPF1Q92900 1129 aaKnown RBP eCLIP13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 NRBF2Q96F24 287 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 ECSITQ9BQ95 431 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 DNAJC28Q9NX36 388 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 ATP11BQ9Y2G3 1177 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 CD3EAPO15446 510 aaKnown RBP13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 HSPA13P48723 471 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 BTG3Q14201 252 aaPredicted RBP13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 FRG1Q14331 258 aaKnown RBP13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 DHDDSQ86SQ9 333 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 DIS3LQ8TF46 1054 aaKnown RBP13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 PTCD2Q8WV60 388 aaKnown RBP13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 TBATAQ96M53 351 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 HAPLN3Q96S86 360 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 YME1L1Q96TA2 773 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 THUMPD3Q9BV44 507 aaKnown RBP13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 ZCWPW1Q9H0M4 648 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 KLF11O14901 512 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 MYO1DO94832 1006 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 TBX18O95935 607 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 CXCR3P49682 368 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 ARHGDIAP52565 204 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 HNRNPDQ14103 355 aaKnown RBP13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 HECTD2Q5U5R9 776 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 ISLR2Q6UXK2 745 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 ZYG11AQ6WRX3 759 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 HPS6Q86YV9 775 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 ACOX2Q99424 681 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 TTPALQ9BTX7 342 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 ZMYND8Q9ULU4 1186 aaPredicted RBP13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 NDUFAF1Q9Y375 327 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 MAGEC1O60732 1142 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 GPRIN1Q7Z2K8 1008 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 MIER2Q8N344 545 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 CCT7Q99832 543 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 WARS2Q9UGM6 360 aaKnown RBP13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 LNPEPQ9UIQ6 1025 aa13.5□□□□□ -0.25
PCDHB9-201ENST00000316105 COL11A2P13942 1736 aaPredicted RBP13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 PTGESO14684 152 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 IL2P60568 153 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 STXBP5Q5T5C0 1151 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 TRNP1Q6NT89 227 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 ZFP1Q6P2D0 407 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 FNDC5Q8NAU1 212 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 OR4L1Q8NH43 312 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 B3GALT6Q96L58 329 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 FCRL5Q96RD9 977 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 MLPHQ9BV36 600 aaPredicted RBP13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 STX18Q9P2W9 335 aaKnown RBP13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 RBM47A0AV96 593 aaKnown RBP13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 HLA-DQB2P05538 268 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 GALNT2Q10471 571 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 ACSBG2Q5FVE4 666 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 GPSM1Q86YR5 675 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 TP53INP2Q8IXH6 220 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 METTL6Q8TCB7 284 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 VPS50Q96JG6 964 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 LENG8Q96PV6 779 aaPredicted RBP13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 PAAF1Q9BRP4 392 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 HGH1Q9BTY7 390 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 OSBPL2Q9H1P3 480 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 PRKAG3Q9UGI9 489 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 TRIM17Q9Y577 477 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 CITO14578 2027 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 EVPLQ92817 2033 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 TCRBV5S1A1TA0A578 114 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 CA12O43570 354 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 CCNT2O60583 730 aaKnown RBP13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 CHRNGP07510 517 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 ZNF7P17097 686 aaPredicted RBP13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 PSMC3P17980 439 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 SLC1A2P43004 574 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 NOGQ13253 232 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 GPR158Q5T848 1215 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 ARMC12Q5T9G4 340 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 AGMOQ6ZNB7 445 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 ZBTB49Q6ZSB9 765 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 CUZD1Q86UP6 607 aa13.49□□□□□ -0.25
PCDHB9-201ENST00000316105 DHFR2Q86XF0 187 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms