RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 STXBP5Q5T5C0 1151 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 CACHD1Q5VU97 1274 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 SLC22A9Q8IVM8 553 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 RAVER1Q8IY67 606 aaKnown RBP9.32□□□□□ -0.92
PTPRE-202ENST00000306042 OR10G6Q8NH81 332 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 ATL1Q8WXF7 558 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 FERD3LQ96RJ6 166 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 SHANK3Q9BYB0 1731 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 ASPSCR1Q9BZE9 553 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 SLC39A8Q9C0K1 460 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 DPEP2Q9H4A9 486 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 IL36AQ9UHA7 158 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 HCFC2Q9Y5Z7 792 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 PIAS3Q9Y6X2 628 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 COL24A1Q17RW2 1714 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 ZBTB42B2RXF5 422 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 TMEM189-UBE2V1I3L0A0 370 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 CCDC22O60826 627 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 FGFR3P22607 806 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 GPC1P35052 558 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 SPAM1P38567 509 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 NEK3P51956 506 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 GABPB1Q06547 395 aaPredicted RBP9.32□□□□□ -0.92
PTPRE-202ENST00000306042 CHI3L2Q15782 390 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 ARMCX6Q7L4S7 300 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 HID1Q8IV36 788 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 SH2D3CQ8N5H7 860 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 OR4K2Q8NGD2 314 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 GTPBP2Q9BX10 602 aaKnown RBP9.32□□□□□ -0.92
PTPRE-202ENST00000306042 SELENONQ9NZV5 590 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 DMGDHQ9UI17 866 aaKnown RBP9.32□□□□□ -0.92
PTPRE-202ENST00000306042 LZTS1Q9Y250 596 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 EIF3LQ9Y262 564 aaKnown RBP9.32□□□□□ -0.92
PTPRE-202ENST00000306042 TAF1LQ8IZX4 1826 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 FAM95CA0A1B0GW59 222 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 TMEM120BA0PK00 339 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 RFXAPO00287 272 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 MAPK1P28482 360 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 PEX5P50542 639 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 NAB1Q13506 487 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 ARSIQ5FYB1 569 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 WDR45BQ5MNZ6 344 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 SNAP47Q5SQN1 464 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 BEND6Q5SZJ8 279 aaPredicted RBP9.32□□□□□ -0.92
PTPRE-202ENST00000306042 SH3PXD2AQ5TCZ1 1133 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 RHBDF2Q6PJF5 856 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 PRUNE1Q86TP1 453 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 BBS7Q8IWZ6 715 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 NKAPQ8N5F7 415 aaKnown RBP9.32□□□□□ -0.92
PTPRE-202ENST00000306042 PCDH20Q8N6Y1 951 aaKnown RBP9.32□□□□□ -0.92
PTPRE-202ENST00000306042 ALG3Q92685 438 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 C1QTNF1Q9BXJ1 281 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 ILKAPQ9H0C8 392 aaPredicted RBP9.32□□□□□ -0.92
PTPRE-202ENST00000306042 LRRC19Q9H756 370 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 FBXO6Q9NRD1 293 aaPredicted RBP9.32□□□□□ -0.92
PTPRE-202ENST00000306042 NCKIPSDQ9NZQ3 722 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 TBX21Q9UL17 535 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 CDYLQ9Y232 598 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 HS3ST4Q9Y661 456 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 SBF2Q86WG5 1849 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 MGAT4DA6NG13 374 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 NOL3O60936 208 aaKnown RBP9.32□□□□□ -0.92
PTPRE-202ENST00000306042 HAUS5O94927 633 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 KLF8O95600 359 aaPredicted RBP9.32□□□□□ -0.92
PTPRE-202ENST00000306042 ANXA5P08758 320 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 RUNX3Q13761 415 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 RRM2BQ7LG56 351 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 RFWD2Q8NHY2 731 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 JADE3Q92613 823 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 TUBGCP3Q96CW5 907 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 CEP295NLQ96MC4 621 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 ACOX2Q99424 681 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 SHCBP1LQ9BZQ2 653 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 FGFR1OP2Q9NVK5 253 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 FNIP2Q9P278 1114 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 ZFP69BQ9UJL9 534 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 A0A096LPK6 155 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 CCDC160A6NGH7 325 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 DLDP09622 509 aaKnown RBP9.31□□□□□ -0.92
PTPRE-202ENST00000306042 CDKN2BP42772 138 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 FAM133BQ5BKY9 247 aaKnown RBP9.31□□□□□ -0.92
PTPRE-202ENST00000306042 OLFML1Q6UWY5 402 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 Q6ZVU0 165 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 ZCCHC9Q8N567 271 aaKnown RBP9.31□□□□□ -0.92
PTPRE-202ENST00000306042 GIMAP7Q8NHV1 300 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 REPS1Q96D71 796 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 CERS2Q96G23 380 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 FIZ1Q96SL8 496 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 GDE1Q9NZC3 331 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 VIRMAQ69YN4 1812 aaKnown RBP9.31□□□□□ -0.92
PTPRE-202ENST00000306042 C2orf78A6NCI8 922 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 TRIM43BA6NCK2 446 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 CD48P09326 243 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 PIK3CGP48736 1102 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 ABRQ12979 859 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 MS4A13Q5J8X5 152 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 GDPD4Q6W3E5 623 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 GPSM1Q86YR5 675 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 LMNTD2Q8IXW0 634 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 TRIM43Q96BQ3 446 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms