RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 SMARCD1Q96GM5 515 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 NR1H4Q96RI1 486 aaPredicted RBP14.16□□□□□ -0.14
SDC2-201ENST00000302190 SIKE1Q9BRV8 207 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 BPIFA1Q9NP55 256 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 MRPL40Q9NQ50 206 aaKnown RBP14.16□□□□□ -0.14
SDC2-201ENST00000302190 PSMD13Q9UNM6 376 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 PCDHB12Q9Y5F1 795 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 ZNFX1Q9P2E3 1918 aaKnown RBP14.16□□□□□ -0.14
SDC2-201ENST00000302190 MEIS3P2A8K0S8 358 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 DARSP14868 501 aaKnown RBP14.16□□□□□ -0.14
SDC2-201ENST00000302190 HMOX2P30519 316 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 OR1E1P30953 314 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 LHX1P48742 406 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 CAP1Q01518 475 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 POU4F1Q01851 419 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 ARHGAP1Q07960 439 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 GALNT3Q14435 633 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 ARHGAP36Q6ZRI8 547 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 UTS2BQ765I0 119 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 NAT14Q8WUY8 206 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 LRTOMTQ8WZ04 291 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 LPGAT1Q92604 370 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 RMND5BQ96G75 393 aaPredicted RBP14.16□□□□□ -0.14
SDC2-201ENST00000302190 TBCDQ9BTW9 1192 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 RHOJQ9H4E5 214 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 SMPD4Q9NXE4 827 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 FZD10Q9ULW2 581 aa14.16□□□□□ -0.14
SDC2-201ENST00000302190 CBX4O00257 560 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 ZBTB14O43829 449 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 CDH15P55291 814 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 PLCL1Q15111 1095 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 GSTA3Q16772 222 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 RAP1GAP2Q684P5 730 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 CFAP52Q8N1V2 620 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 UBR7Q8N806 425 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 ABCG8Q9H221 673 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 VTA1Q9NP79 307 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 LRFN2Q9ULH4 789 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 CABYRO75952 493 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 NR4A1P22736 598 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 ADARP55265 1226 aaKnown RBP14.15□□□□□ -0.14
SDC2-201ENST00000302190 ZBTB17Q13105 803 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 VPS26BQ4G0F5 336 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 HEXDCQ8WVB3 486 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 PAIP1Q9H074 479 aaKnown RBP14.15□□□□□ -0.14
SDC2-201ENST00000302190 CYLDQ9NQC7 956 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 PRDM5Q9NQX1 630 aaPredicted RBP14.15□□□□□ -0.14
SDC2-201ENST00000302190 ZMYM5Q9UJ78 669 aa14.15□□□□□ -0.14
SDC2-201ENST00000302190 A0A088AWK7 358 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 MYO1GB0I1T2 1018 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 PAGE1O75459 146 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 FBXO21O94952 628 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 GLP2RO95838 553 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 ATP6V1B2P21281 511 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 GALK1P51570 392 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 PAOXQ6QHF9 649 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 CCDC81Q6ZN84 652 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 GPR141Q7Z602 305 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 ACVR1CQ8NER5 493 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 TSPAN14Q8NG11 270 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 FBXO32Q969P5 355 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 MUC3BQ9H195 1237 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 FBRSL1Q9HCM7 1045 aaKnown RBP14.14□□□□□ -0.15
SDC2-201ENST00000302190 FLRT1Q9NZU1 646 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 ST3GAL5Q9UNP4 418 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 SLC27A5Q9Y2P5 690 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 PTGES3LE9PB15 166 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 CLOCKO15516 846 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 ADCY6O43306 1168 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 AHSGP02765 367 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 MYL4P12829 197 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 HGFP14210 728 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 YWHAQP27348 245 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 CTGFP29279 349 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 PSEN2P49810 448 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 NAPRTQ6XQN6 538 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 TAC4Q86UU9 113 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 OSTM1Q86WC4 334 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 RP9Q8TA86 221 aaKnown RBP14.14□□□□□ -0.15
SDC2-201ENST00000302190 C17orf80Q9BSJ5 609 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 SPATA16Q9BXB7 569 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 UXTQ9UBK9 157 aaPredicted RBP14.14□□□□□ -0.15
SDC2-201ENST00000302190 TLL2Q9Y6L7 1015 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 SLCO1B7G3V0H7 640 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 AGRPO00253 132 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 SIX3O95343 332 aaPredicted RBP14.14□□□□□ -0.15
SDC2-201ENST00000302190 RBP1P09455 135 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 ATP5F1P24539 256 aaPredicted RBP14.14□□□□□ -0.15
SDC2-201ENST00000302190 PTPRCAPQ14761 206 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 MRNIPQ6NTE8 343 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 CLEC20AQ6ZU45 233 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 SPPL2CQ8IUH8 684 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 OFCC1Q8IZS5 231 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 SNX27Q96L92 541 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 EURLQ9NYK6 297 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 NDUFAF1Q9Y375 327 aa14.14□□□□□ -0.15
SDC2-201ENST00000302190 BTN3A1O00481 513 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 PSMD3O43242 534 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 ARSAP15289 507 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 RPL5P46777 297 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms