RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 HTR7P34969 479 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 IGFALSP35858 605 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 LSSP48449 732 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 GSCP56915 257 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-202ENST00000262396 ERVPABLB-1P60509 514 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 BCL2L1Q07817 233 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 EIF2B5Q13144 721 aaKnown RBP12.37□□□□□ -0.43
TRAF4-202ENST00000262396 BIRC2Q13490 618 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 SERINC3Q13530 473 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 ISXQ2M1V0 245 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 C6orf132Q5T0Z8 1188 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 MON1BQ7L1V2 547 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 ARL14Q8N4G2 192 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 GRAMD1AQ96CP6 724 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 CELF6Q96J87 481 aaKnown RBP12.37□□□□□ -0.43
TRAF4-202ENST00000262396 KLF6Q99612 283 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-202ENST00000262396 SUV39H2Q9H5I1 410 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 PRORYQ9H606 182 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 ATP13A3Q9H7F0 1226 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 CAAP1Q9H8G2 361 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 DKK3Q9UBP4 350 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 KLQ9UEF7 1012 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 PCSK1NQ9UHG2 260 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 PADI4Q9UM07 663 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 AP4E1Q9UPM8 1137 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 SATB2Q9UPW6 733 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 COQ6Q9Y2Z9 468 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 EME2A4GXA9 379 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-202ENST00000262396 LMO7DNF2Z398 122 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 CACNB4O00305 520 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-202ENST00000262396 AREL1O15033 823 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 YY2O15391 372 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 SPINT1O43278 529 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 PRPSAP2O60256 369 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 TCEA3O75764 348 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 GIMD1P0DJR0 217 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 TSHRP16473 764 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 ITIH2P19823 946 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 TGM2P21980 687 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 NFKBIAP25963 317 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 NDST2P52849 883 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 RPL7AP62424 266 aaKnown RBP12.36□□□□□ -0.43
TRAF4-202ENST00000262396 POLR2LP62875 67 aaKnown RBP12.36□□□□□ -0.43
TRAF4-202ENST00000262396 TLE3Q04726 772 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 PTP4A2Q12974 167 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 IRF4Q15306 451 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 ASIC2Q16515 512 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 UGP2Q16851 508 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 PPP6R3Q5H9R7 873 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-202ENST00000262396 ARHGAP40Q5TG30 622 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 CDCP2Q5VXM1 449 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 BRAT1Q6PJG6 821 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 JAMLQ86YT9 394 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 MCOLN2Q8IZK6 566 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 AOPEPQ8N6M6 819 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 NSMCE1Q8WV22 266 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 TSACCQ96A04 125 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-202ENST00000262396 CENPTQ96BT3 561 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 ATXN7L3BQ96GX2 97 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 VCPIP1Q96JH7 1222 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 ZNF641Q96N77 438 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-202ENST00000262396 BBC3Q96PG8 261 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-202ENST00000262396 CCDC3Q9BQI4 270 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 LRRC61Q9BV99 259 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 CPEB1Q9BZB8 566 aaKnown RBP12.36□□□□□ -0.43
TRAF4-202ENST00000262396 STRADBQ9C0K7 418 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 TCEAL2Q9H3H9 227 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-202ENST00000262396 EPB41L5Q9HCM4 733 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 PCDH12Q9NPG4 1184 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 MBNL1Q9NR56 388 aaKnown RBP12.36□□□□□ -0.43
TRAF4-202ENST00000262396 GPATCH2LQ9NWQ4 482 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 KLF15Q9UIH9 416 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 GPR34Q9UPC5 381 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 MFHAS1Q9Y4C4 1052 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 TRPM6Q9BX84 2022 aa12.36□□□□□ -0.43
TRAF4-202ENST00000262396 TDRD6O60522 2096 aaKnown RBP12.35□□□□□ -0.43
TRAF4-202ENST00000262396 SMTNL1A8MU46 457 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 WASH4PA8MWX3 477 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 ATXN7O15265 892 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-202ENST00000262396 INSIG1O15503 277 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 GCATO75600 419 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 ELFN1P0C7U0 828 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 C6P13671 934 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 KELP23276 732 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 PPM1FP49593 454 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-202ENST00000262396 LIG3P49916 1009 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 PEX5P50542 639 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 PAPOLAP51003 745 aaKnown RBP12.35□□□□□ -0.43
TRAF4-202ENST00000262396 RENBPP51606 427 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 HK3P52790 923 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 INPP5AQ14642 412 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 CYTH1Q15438 398 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 TMEM52BQ4KMG9 183 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 CCDC183Q5T5S1 534 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 ERMARDQ5T6L9 678 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 UMODL1-AS1Q8N2C9 162 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 BBS5Q8N3I7 341 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 TP53I13Q8NBR0 393 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-202ENST00000262396 WDR36Q8NI36 951 aaKnown RBP12.35□□□□□ -0.43
TRAF4-202ENST00000262396 HCAR2Q8TDS4 363 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms