RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 PkdccQ5RJI4 492 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 2700097O09RikQ6PGK3 301 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Tmem270Q6UJB9 264 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gsdmc3Q8CB12 480 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 S100pbpQ9D5K4 396 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Fam47eD3YWC7 402 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Cntnap3E9PY62 1287 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 WapP01173 134 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Serpina3kP07759 418 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Tap1P21958 724 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Sec31bQ3TZ89 1158 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Phactr4Q501J7 694 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Bfsp2Q6NVD9 416 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Fam126aQ6P9N1 521 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Olfr1198Q7TR12 308 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Fbxo38Q8BMI0 1194 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Pcdha6Q91Y14 946 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Nudt8Q9CR24 210 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ube4bQ9ES00 1173 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Nphs1Q9QZS7 1256 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 NynrinQ5DTZ0 1840 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ttc6G3UYY4 1857 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Zmynd12A2BGJ5 363 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 P01740 135 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 MaptP10637 733 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 HmgcrQ01237 887 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Mc1rQ01727 315 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gspt2Q149F3 632 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Patl1Q3TC46 770 aaKnown RBP8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 MyorgQ69ZQ1 716 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Naif1Q6PFD7 327 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Plin5Q8BVZ1 463 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Taf10Q8K0H5 218 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Impg1Q8R1W8 798 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Mapk8Q91Y86 384 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Vps28Q9D1C8 221 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 ArskQ9D2L1 553 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Scamp5Q9JKD3 235 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 NfkbiaQ9Z1E3 314 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gm45713A0A1B0GS68 446 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 4931406B18RikA2RSL7 367 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Zbed5B2RPU8 756 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Dthd1E9PZX1 795 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ifrd1P19182 449 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 EsrrgP62509 458 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 PrkczQ02956 592 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Zfp560Q3URI6 754 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Plcl1Q3USB7 1096 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Clec1aQ8BWY2 269 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Slc8a2Q8K596 921 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Vmn1r214Q8R279 367 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Smyd2Q8R5A0 433 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 AclyQ91V92 1091 aaKnown RBP8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ddx59Q9DBN9 619 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Syvn1Q9DBY1 612 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 GraspQ9JJA9 392 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Zscan12Q9Z1D7 501 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Pnldc1B2RXZ1 531 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 SnnP61807 88 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Polr1bP70700 1135 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 KrtdapQ3V2T4 102 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Fam160a1Q505K2 1081 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 ADGRF3Q58Y75 991 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Arhgap26Q6ZQ82 814 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Deup1Q7M6Y5 601 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Csnk1g1Q8BTH8 459 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Zbtb6Q8K088 423 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Znf622Q91VY9 476 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Tmem114Q9D563 222 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ovca2Q9D7E3 225 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Poc5Q9DBS8 558 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 CasrQ9QY96 1079 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 PigqQ9QYT7 581 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gys1Q9Z1E4 738 aaKnown RBP8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gm13212B1ASQ7 799 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gm5415E9PXF3 478 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Pik3cdO35904 1043 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Zfp868Q3UTQ6 422 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Lingo3Q6GQU6 589 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Dnajc15Q78YY6 149 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 ScocQ78YZ6 125 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Abraxas1Q8BPZ8 407 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Fam151aQ8QZW3 608 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Basp1Q91XV3 226 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Bbox1Q924Y0 387 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Pex6Q99LC9 981 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 GsdmcQ99NB5 468 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 CatsperzQ9CQP8 194 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Tbc1d20Q9D9I4 402 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Aldh1a3Q9JHW9 512 aa8.54□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 VirmaA2AIV2 1811 aaKnown RBP8.53□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 1700011I03RikE9PYL8 271 aa8.53□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Speer4eK7N6S8 255 aa8.53□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Vmn2r88L7N1W8 857 aa8.53□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Hexim2Q3TVI4 313 aa8.53□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ckap2lQ7TS74 745 aa8.53□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Suz12Q80U70 741 aaKnown RBP8.53□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Samd4bQ80XS6 687 aa8.53□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Wasf2Q8BH43 497 aa8.53□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Parp9Q8CAS9 866 aa8.53□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms