RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 GSCP56915 257 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-213ENST00000641272 PRRT3Q5FWE3 981 aa16.92■□□□□ 0.3
PHGDH-213ENST00000641272 PERM1Q5SV97 790 aa16.92■□□□□ 0.3
PHGDH-213ENST00000641272 CACTIN-AS1Q8N1I8 211 aa16.92■□□□□ 0.3
PHGDH-213ENST00000641272 FAM181AQ8N9Y4 354 aa16.92■□□□□ 0.3
PHGDH-213ENST00000641272 C3orf20Q8ND61 904 aa16.92■□□□□ 0.3
PHGDH-213ENST00000641272 LENG8Q96PV6 779 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-213ENST00000641272 NCAPGQ9BPX3 1015 aa16.92■□□□□ 0.3
PHGDH-213ENST00000641272 OSBPL1AQ9BXW6 950 aa16.92■□□□□ 0.3
PHGDH-213ENST00000641272 MBNL1Q9NR56 388 aaKnown RBP16.92■□□□□ 0.3
PHGDH-213ENST00000641272 EVA1BQ9NVM1 165 aa16.92■□□□□ 0.3
PHGDH-213ENST00000641272 LHX3Q9UBR4 397 aa16.92■□□□□ 0.3
PHGDH-213ENST00000641272 PMS2P1A4D2B8 440 aa16.91■□□□□ 0.3
PHGDH-213ENST00000641272 LGALS16A8MUM7 142 aa16.91■□□□□ 0.3
PHGDH-213ENST00000641272 RASA4BC9J798 803 aa16.91■□□□□ 0.3
PHGDH-213ENST00000641272 ATMINO43313 823 aaPredicted RBP16.91■□□□□ 0.3
PHGDH-213ENST00000641272 RASA4O43374 803 aa16.91■□□□□ 0.3
PHGDH-213ENST00000641272 POP4O95707 220 aaKnown RBP16.91■□□□□ 0.3
PHGDH-213ENST00000641272 PRKCGP05129 697 aa16.91■□□□□ 0.3
PHGDH-213ENST00000641272 GP1BAP07359 652 aa16.91■□□□□ 0.3
PHGDH-213ENST00000641272 PCBP4P57723 403 aaKnown RBP16.91■□□□□ 0.3
PHGDH-213ENST00000641272 RPL7AP62424 266 aaKnown RBP16.91■□□□□ 0.3
PHGDH-213ENST00000641272 IRF4Q15306 451 aa16.91■□□□□ 0.3
PHGDH-213ENST00000641272 KLHL40Q2TBA0 621 aa16.91■□□□□ 0.3
PHGDH-213ENST00000641272 CT47A1Q5JQC4 288 aaPredicted RBP16.91■□□□□ 0.3
PHGDH-213ENST00000641272 NYAP1Q6ZVC0 841 aa16.91■□□□□ 0.3
PHGDH-213ENST00000641272 TTC7BQ86TV6 843 aa16.91■□□□□ 0.3
PHGDH-213ENST00000641272 ZSCAN30Q86W11 494 aa16.91■□□□□ 0.3
PHGDH-213ENST00000641272 PHF13Q86YI8 300 aaPredicted RBP16.91■□□□□ 0.3
PHGDH-213ENST00000641272 PLPP6Q8IY26 295 aa16.91■□□□□ 0.3
PHGDH-213ENST00000641272 ARHGEF26Q96DR7 871 aa16.91■□□□□ 0.3
PHGDH-213ENST00000641272 IL12RB2Q99665 862 aa16.91■□□□□ 0.3
PHGDH-213ENST00000641272 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.91■□□□□ 0.3
PHGDH-213ENST00000641272 TTYH3Q9C0H2 523 aa16.91■□□□□ 0.3
PHGDH-213ENST00000641272 RP1P56715 2156 aa16.91■□□□□ 0.3
PHGDH-213ENST00000641272 KIF26BQ2KJY2 2108 aa16.9■□□□□ 0.3
PHGDH-213ENST00000641272 ZSCAN5CA6NGD5 496 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-213ENST00000641272 GCATO75600 419 aa16.9■□□□□ 0.3
PHGDH-213ENST00000641272 C1QL1O75973 258 aa16.9■□□□□ 0.3
PHGDH-213ENST00000641272 TM7SF2O76062 418 aa16.9■□□□□ 0.3
PHGDH-213ENST00000641272 XPAP23025 273 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-213ENST00000641272 ADKP55263 362 aaKnown RBP16.9■□□□□ 0.3
PHGDH-213ENST00000641272 NR0B2Q15466 257 aa16.9■□□□□ 0.3
PHGDH-213ENST00000641272 FOXR1Q6PIV2 292 aa16.9■□□□□ 0.3
PHGDH-213ENST00000641272 SLC35F3Q8IY50 421 aa16.9■□□□□ 0.3
PHGDH-213ENST00000641272 TP53I13Q8NBR0 393 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-213ENST00000641272 SLC39A7Q92504 469 aa16.9■□□□□ 0.3
PHGDH-213ENST00000641272 CENPTQ96BT3 561 aa16.9■□□□□ 0.3
PHGDH-213ENST00000641272 ATXN7L3BQ96GX2 97 aa16.9■□□□□ 0.3
PHGDH-213ENST00000641272 CELF6Q96J87 481 aaKnown RBP16.9■□□□□ 0.3
PHGDH-213ENST00000641272 USP29Q9HBJ7 922 aa16.9■□□□□ 0.3
PHGDH-213ENST00000641272 SPASTQ9UBP0 616 aa16.9■□□□□ 0.3
PHGDH-213ENST00000641272 FZD10Q9ULW2 581 aa16.9■□□□□ 0.3
PHGDH-213ENST00000641272 SATB2Q9UPW6 733 aa16.9■□□□□ 0.3
PHGDH-213ENST00000641272 CXorf51AA0A1B0GTR3 108 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 A0A1W2PNU3 283 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-213ENST00000641272 TCRBV5S1A1TA0A578 114 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 ANKRD62A6NC57 917 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 TIMP2P16035 220 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 ZNF143P52747 638 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-213ENST00000641272 TPI1P60174 286 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 MYL5Q02045 173 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 OGDHQ02218 1023 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 UBXN1Q04323 297 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 RAD51Q06609 339 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 C1QBPQ07021 282 aaKnown RBP16.89■□□□□ 0.29
PHGDH-213ENST00000641272 ISXQ2M1V0 245 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 FAXCQ5TGI0 409 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 MACC1Q6ZN28 852 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 DNAAF5Q86Y56 855 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 ZNF248Q8NDW4 579 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 AGPAT1Q99943 283 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 SLC13A1Q9BZW2 595 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 POLR1BQ9H9Y6 1135 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 CPNE5Q9HCH3 593 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 SIRPGQ9P1W8 387 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 UBA2Q9UBT2 640 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-213ENST00000641272 CSNK1G3Q9Y6M4 447 aa16.89■□□□□ 0.29
PHGDH-213ENST00000641272 GCN1Q92616 2671 aaKnown RBP16.88■□□□□ 0.29
PHGDH-213ENST00000641272 SIGLEC16A6NMB1 481 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 TMCO5BA8MYB1 307 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 ATXN7O15265 892 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-213ENST00000641272 ZIC2O95409 532 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-213ENST00000641272 PCCBP05166 539 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 ANXA6P08133 673 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 TSHRP16473 764 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 EIF4A3P38919 411 aaKnown RBP16.88■□□□□ 0.29
PHGDH-213ENST00000641272 SERINC3Q13530 473 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 PTK2BQ14289 1009 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 CYTH1Q15438 398 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 DCUN1D2Q6PH85 259 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 GPR155Q7Z3F1 870 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 KYQ8NBH2 561 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 ANKRD20A12PQ8NF67 263 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 BTN2A2Q8WVV5 523 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 KCNE4Q8WWG9 221 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 ASB12Q8WXK4 309 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 VCPIP1Q96JH7 1222 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 ZNF578Q96N58 590 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-213ENST00000641272 C1QTNF7Q9BXJ2 289 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms