RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 CATP04040 527 aaKnown RBP13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 CKAP2Q8WWK9 683 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 CISHQ9NSE2 258 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 ZNF318Q5VUA4 2279 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 FAM86C2PA6NEL3 165 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 AXLP30530 894 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 AMIGO1Q86WK6 493 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 MEIOBQ8N635 442 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 KLK14Q9P0G3 267 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 COG5Q9UP83 839 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 PLAGL2Q9UPG8 496 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 ARHGEF28Q8N1W1 1705 aaKnown RBP13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 OR14I1A6ND48 311 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 UBOX5O94941 541 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 ZNF286BP0CG31 522 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 CXorf40AQ8TE69 158 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 PPP3R2Q96LZ3 170 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 PNMA5Q96PV4 448 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 OSBPL11Q9BXB4 747 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 MCM8Q9UJA3 840 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 PDHA2P29803 388 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 BCL2L1Q07817 233 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 PRAMEF18Q5VWM3 479 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 ZCCHC9Q8N567 271 aaKnown RBP13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 TEFMQ96QE5 360 aaKnown RBP13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 CDADC1Q9BWV3 514 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 SVILO95425 2214 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 EPORP19235 508 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 CES1P23141 567 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 RIPPLY1Q0D2K3 151 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 PFKFB4Q16877 469 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 DOK6Q6PKX4 331 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 HIPK1Q86Z02 1210 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 SIRT2Q8IXJ6 389 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 NOA1Q8NC60 698 aaKnown RBP13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 ACE2Q9BYF1 805 aaPredicted RBP13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 RBM22Q9NW64 420 aaKnown RBP eCLIP13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 POLLQ9UGP5 575 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 FKTNO75072 461 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 FTH1P02794 183 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 BMP7P18075 431 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 GPAT3Q53EU6 434 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 VPS35Q96QK1 796 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 SLC35C2Q9NQQ7 365 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 DDX18Q9NVP1 670 aaKnown RBP13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 FCHO1O14526 889 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 FOXN1O15353 648 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 CYP11B2P19099 503 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 ACAT1P24752 427 aaKnown RBP13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 AFTPHQ6ULP2 937 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 PLEKHA1Q9HB21 404 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 DKK3Q9UBP4 350 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 ATPIF1Q9UII2 106 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 MEGF6O75095 1541 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 LRIG2O94898 1065 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 DPYSQ14117 519 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 ANXA8L1Q5VT79 327 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 IRGCQ6NXR0 463 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 MINDY2Q8NBR6 621 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 MEMO1Q9Y316 297 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 FOSL2P15408 326 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 CXCL9Q07325 125 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 MEA1Q16626 185 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 ZNF410Q86VK4 478 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 ACSF2Q96CM8 615 aaPredicted RBP13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 ATP13A1Q9HD20 1204 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 LEF1Q9UJU2 399 aaPredicted RBP13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 CDK16Q00536 496 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 TYSND1Q2T9J0 566 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 POTEHQ6S545 545 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 SLC47A2Q86VL8 602 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 ATG4AQ8WYN0 398 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 EPB41L1Q9H4G0 881 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 TRIM17Q9Y577 477 aa13.28□□□□□ -0.28
SYNGAP1-208ENST00000629380 BCL9O00512 1426 aa13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 RGS10O43665 173 aa13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 PROSCO94903 275 aa13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 MAGEA2P43356 314 aa13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 QSOX2Q6ZRP7 698 aa13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 RD3Q7Z3Z2 195 aa13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 PTCD3Q96EY7 689 aaKnown RBP13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 SPATC1LQ9H0A9 340 aa13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 TOR4AQ9NXH8 423 aa13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 PTGFRNQ9P2B2 879 aa13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 UMODL1Q5DID0 1318 aa13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 STAG3L4Q8TBR4 150 aa13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 TESCQ96BS2 214 aa13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 TDRD1Q9BXT4 1180 aaKnown RBP13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 POLR1EQ9GZS1 481 aaKnown RBP13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 TMX2Q9Y320 296 aa13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 TIPRLO75663 272 aa13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 ARF4P18085 180 aaPredicted RBP13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 NR1H2P55055 460 aa13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 ZDHHC6Q9H6R6 413 aa13.27□□□□□ -0.28
SYNGAP1-208ENST00000629380 MAPTP10636 758 aaKnown RBP13.27□□□□□ -0.29
SYNGAP1-208ENST00000629380 FGFR3P22607 806 aa13.27□□□□□ -0.29
SYNGAP1-208ENST00000629380 ST3GAL1Q11201 340 aa13.27□□□□□ -0.29
SYNGAP1-208ENST00000629380 DEFB115Q30KQ5 88 aa13.27□□□□□ -0.29
SYNGAP1-208ENST00000629380 EPC2Q52LR7 807 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms