RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 TSC2P49815 1807 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 A0A1B0GVT2 93 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 TCRBV16S1A1N1A0A5B0 115 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 H0Y626 953 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 TRIM16O95361 564 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 ATXN1LP0C7T5 689 aaKnown RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 FAM200BP0CF97 657 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 RARGP13631 454 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 CD6P30203 668 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 PIK3CAP42336 1068 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 POU5F1Q01860 360 aaKnown RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 SEMG2Q02383 582 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 IFI16Q16666 785 aaKnown RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 CBWD6Q4V339 395 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 CBWD3Q5JTY5 395 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 CBWD5Q5RIA9 395 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 RNF219Q5W0B1 726 aaPredicted RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 ALS2CLQ60I27 953 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 PIP4P1Q86T03 277 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 C12orf56Q8IXR9 622 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 IFT20Q8IY31 132 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 MYO1HQ8N1T3 1032 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 LMO3Q8TAP4 145 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 BAHD1Q8TBE0 780 aaPredicted RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 DDI1Q8WTU0 396 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 PBKQ96KB5 322 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 SMOQ99835 787 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 STK33Q9BYT3 514 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 ZNF700Q9H0M5 742 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 FAM124BQ9H5Z6 455 aaPredicted RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 TM7SF3Q9NS93 570 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 SFMBT1Q9UHJ3 866 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 PACSIN2Q9UNF0 486 aaPredicted RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 STON1Q9Y6Q2 735 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 DENND4CQ5VZ89 1909 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 GOLGA8KD6RF30 607 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 DDX3YO15523 660 aaKnown RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 HEXIM1O94992 359 aaKnown RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 FSBPO95073 299 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 OLFM2O95897 454 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 PRB1P04280 392 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 ECHS1P30084 290 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 STAT1P42224 750 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 NAP1L1P55209 391 aaKnown RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 DLG4P78352 724 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 MRPS25P82663 173 aaKnown RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 RPS6KA1Q15418 735 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 GEN1Q17RS7 908 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 HSF5Q4G112 596 aaPredicted RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 DCAF12L1Q5VU92 463 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 LRRC31Q6UY01 552 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 PAQR9Q6ZVX9 377 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 RABEPKQ7Z6M1 372 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 SLCO6A1Q86UG4 719 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 DENND1CQ8IV53 801 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 WDR75Q8IWA0 830 aaKnown RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 CASKIN2Q8WXE0 1202 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 PRCCQ92733 491 aaPredicted RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 KCNN1Q92952 543 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 OTUB2Q96DC9 234 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 DPH2Q9BQC3 489 aaPredicted RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 IMPG2Q9BZV3 1241 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 INTS2Q9H0H0 1204 aaKnown RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 SDCBP2Q9H190 292 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 NMUR1Q9HB89 426 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 OSER1Q9NX31 292 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 WDR35Q9P2L0 1181 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 SLCO1B1Q9Y6L6 691 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 ARID1BQ8NFD5 2236 aaPredicted RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 ZSCAN5CA6NGD5 496 aaPredicted RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 KIAA0391O15091 583 aaKnown RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 BCAT2O15382 392 aaPredicted RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 HOXC11O43248 304 aaPredicted RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 RAD51CO43502 376 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 ALBP02768 609 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 TP53P04637 393 aaPredicted RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 SCG5P05408 212 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 IVLP07476 585 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 H2AFZP0C0S5 128 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 P4HA1P13674 534 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 MATKP42679 507 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 IL12RB1P42701 662 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 CARSP49589 748 aaKnown RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 GFRA1P56159 465 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 PSMD6Q15008 389 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 SLC35F1Q5T1Q4 408 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 TCERG1LQ5VWI1 586 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 DHRS13Q6UX07 377 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 H2AFVQ71UI9 128 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 NT5DC3Q86UY8 548 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 IQCKQ8N0W5 287 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 ARHGEF39Q8N4T4 335 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 C1orf131Q8NDD1 294 aaKnown RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 ZMIZ2Q8NF64 920 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 DNAJB8Q8NHS0 232 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 PIP4K2CQ8TBX8 421 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 CYB5D2Q8WUJ1 264 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 UCMAQ8WVF2 138 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 CYFIP2Q96F07 1278 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms