RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 TBC1D3GQ6DHY5 549 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 TBC1D3CQ6IPX1 549 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 FBXL19Q6PCT2 694 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 DPY19L3Q6ZPD9 716 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 USP30Q70CQ3 517 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 ADAT2Q7Z6V5 191 aaKnown RBP7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 TBC1D3Q8IZP1 549 aaPredicted RBP7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 SUMF1Q8NBK3 374 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 CHST14Q8NCH0 376 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 OR2A12Q8NGT7 310 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 RAPGEF5Q92565 580 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 ISG20Q96AZ6 181 aaKnown RBP7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 LOXL4Q96JB6 756 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 ZC3H10Q96K80 434 aaKnown RBP7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 RNF157Q96PX1 679 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 FERMT1Q9BQL6 677 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 OSBPL1AQ9BXW6 950 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 LACRTQ9GZZ8 138 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 KLC2Q9H0B6 622 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 DUSP15Q9H1R2 295 aaPredicted RBP7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 NOL6Q9H6R4 1146 aaKnown RBP7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 RUBCNLQ9H714 662 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 LRRC19Q9H756 370 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 ETNK1Q9HBU6 452 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 SGK2Q9HBY8 427 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 CD248Q9HCU0 757 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 LZTFL1Q9NQ48 299 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 SEPT10Q9P0V9 454 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 TRIM10Q9UDY6 481 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 SEPT3Q9UH03 358 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 EVLQ9UI08 416 aaPredicted RBP7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 MBD1Q9UIS9 605 aaPredicted RBP7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 AMFRQ9UKV5 643 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 FZD4Q9ULV1 537 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 REXO2Q9Y3B8 237 aaKnown RBP7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 DUSP10Q9Y6W6 482 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 CACNA1IQ9P0X4 2223 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 ZDBF2Q9HCK1 2354 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 THADAQ6YHU6 1953 aa7.33□□□□□ -1.24
NPLOC4-221ENST00000625705 CXorf51AA0A1B0GTR3 108 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 GRID2IPA4D2P6 1211 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 MIF4GDA9UHW6 222 aaKnown RBP7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 PLK4O00444 970 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 PJA2O43164 708 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 PCDH8O95206 1070 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 EPN2O95208 641 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 FTCDO95954 541 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 MSX1P28360 303 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 SERPINA4P29622 427 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 ACSL1P33121 698 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 HSPA9P38646 679 aaKnown RBP7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 GARSP41250 739 aaKnown RBP7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 PTGER3P43115 390 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 MMP13P45452 471 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 MAPK8P45983 427 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 ATXN3P54252 364 aaPredicted RBP7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 ADPRHP54922 357 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 RWDD2BP57060 319 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 AP1B1Q10567 949 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 CNTN1Q12860 1018 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 GRM3Q14832 879 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 PAFAH1B3Q15102 231 aaKnown RBP7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 MYLK3Q32MK0 819 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 INO80DQ53TQ3 878 aaPredicted RBP7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 TFDP3Q5H9I0 405 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 ARTNQ5T4W7 220 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 MARC1Q5VT66 337 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 DCAF12L1Q5VU92 463 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 KIAA0895LQ68EN5 471 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 NCEH1Q6PIU2 408 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 GDPD4Q6W3E5 623 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 SPOCD1Q6ZMY3 1216 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 ARHGAP36Q6ZRI8 547 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 BZW1Q7L1Q6 419 aaKnown RBP7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 RABEPKQ7Z6M1 372 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 LRRC49Q8IUZ0 686 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 ARHGAP12Q8IWW6 846 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 KIAA2013Q8IYS2 634 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 KATNAL2Q8IYT4 538 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 RCOR2Q8IZ40 523 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 DCLK2Q8N568 766 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 AADATQ8N5Z0 425 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 PCDH19Q8TAB3 1148 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 PDCD6IPQ8WUM4 868 aaKnown RBP7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 P3H4Q92791 437 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 HAUS1Q96CS2 278 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 POM121Q96HA1 1249 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 LRIG1Q96JA1 1093 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 ZNF599Q96NL3 588 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 FAM129BQ96TA1 746 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 NUSAP1Q9BXS6 441 aaKnown RBP7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 PCED1AQ9H1Q7 454 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 NEUROG2Q9H2A3 272 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 ATP13A3Q9H7F0 1226 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 PDFQ9HBH1 243 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 ETNK2Q9NVF9 386 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 WSB2Q9NYS7 404 aaPredicted RBP7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 LHX3Q9UBR4 397 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 SERGEFQ9UGK8 458 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms