RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 KRT9P35527 623 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 ACVRL1P37023 503 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 PPP1R2P41236 205 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 YPEL5P62699 121 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 CYP4F2P78329 520 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 POLD3Q15054 466 aaPredicted RBP14.89□□□□□ -0.03
PNKP-218ENST00000625299 ELOCQ15369 112 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 TRIM65Q6PJ69 517 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 LEKR1Q6ZMV7 388 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 ZNF574Q6ZN55 896 aaPredicted RBP14.89□□□□□ -0.03
PNKP-218ENST00000625299 FSTL5Q8N475 847 aaPredicted RBP14.89□□□□□ -0.03
PNKP-218ENST00000625299 Q8N9G6 341 aaPredicted RBP14.89□□□□□ -0.03
PNKP-218ENST00000625299 ZSCAN1Q8NBB4 408 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 ZNF397Q8NF99 534 aaPredicted RBP14.89□□□□□ -0.03
PNKP-218ENST00000625299 TSACCQ96A04 125 aaPredicted RBP14.89□□□□□ -0.03
PNKP-218ENST00000625299 ARHGEF26Q96DR7 871 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 TMEM74Q96NL1 305 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 EPAS1Q99814 870 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 C1QTNF7Q9BXJ2 289 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 ZYG11BQ9C0D3 744 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 GPR34Q9UPC5 381 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 UNC13CQ8NB66 2214 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 A0A1W2PQM1 296 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 PPFIA2O75334 1257 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 F9P00740 461 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 ALPIP09923 528 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 SFTPCP11686 197 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 SLC9A1P19634 815 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 BLKP51451 505 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 MAPK10P53779 464 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 PTK2Q05397 1052 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 IRF4Q15306 451 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 TBR1Q16650 682 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 KLHL40Q2TBA0 621 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 ATXN7L2Q5T6C5 722 aaPredicted RBP14.88□□□□□ -0.03
PNKP-218ENST00000625299 FAM102AQ5T9C2 384 aaPredicted RBP14.88□□□□□ -0.03
PNKP-218ENST00000625299 TTC7BQ86TV6 843 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 ZFAND4Q86XD8 727 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 FAM81BQ96LP2 452 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 C1orf74Q96LT6 269 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 EDEM3Q9BZQ6 932 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 PDCL3Q9H2J4 239 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 LRRN3Q9H3W5 708 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 ZNF212Q9UDV6 495 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 ACSL6Q9UKU0 697 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 PCDHB11Q9Y5F2 797 aa14.88□□□□□ -0.03
PNKP-218ENST00000625299 PPP1R3GB7ZBB8 358 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 BIN1O00499 593 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 CD160O95971 181 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 PNMA6AP0CW24 399 aaPredicted RBP14.87□□□□□ -0.03
PNKP-218ENST00000625299 ITIH2P19823 946 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 CCKBRP32239 447 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 HK3P52790 923 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 SNRPD1P62314 119 aaKnown RBP14.87□□□□□ -0.03
PNKP-218ENST00000625299 TLE1Q04724 770 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 ALG11Q2TAA5 492 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 SLC25A52Q3SY17 297 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 ENPP7Q6UWV6 458 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 SLC47A2Q86VL8 602 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 FAM131BQ86XD5 332 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 GKN2Q86XP6 184 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 ZDHHC17Q8IUH5 632 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 LURAP1LQ8IV03 231 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 CCNJLQ8IV13 435 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 TP53I13Q8NBR0 393 aaPredicted RBP14.87□□□□□ -0.03
PNKP-218ENST00000625299 OR2AP1Q8NGE2 309 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 SHC3Q92529 594 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 PGAP3Q96FM1 320 aaPredicted RBP14.87□□□□□ -0.03
PNKP-218ENST00000625299 OSBPL1AQ9BXW6 950 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 FOXJ2Q9P0K8 574 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 APEX2Q9UBZ4 518 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 COQ6Q9Y2Z9 468 aa14.87□□□□□ -0.03
PNKP-218ENST00000625299 LRP4O75096 1905 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 GOLGA8SH3BPF8 625 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 AREL1O15033 823 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 NVLO15381 856 aaKnown RBP14.86□□□□□ -0.03
PNKP-218ENST00000625299 RASGRP1O95267 797 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 GSRP00390 522 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 WT1P19544 449 aaPredicted RBP14.86□□□□□ -0.03
PNKP-218ENST00000625299 ETV5P41161 510 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 MARSP56192 900 aaKnown RBP14.86□□□□□ -0.03
PNKP-218ENST00000625299 PAK1Q13153 545 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 MYLK3Q32MK0 819 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 ACBD5Q5T8D3 534 aaPredicted RBP14.86□□□□□ -0.03
PNKP-218ENST00000625299 RWDD4Q6NW29 188 aaKnown RBP14.86□□□□□ -0.03
PNKP-218ENST00000625299 GDPD4Q6W3E5 623 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 NYAP1Q6ZVC0 841 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 ZNF354CQ86Y25 554 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 PTRH1Q86Y79 214 aaKnown RBP14.86□□□□□ -0.03
PNKP-218ENST00000625299 JPH3Q8WXH2 748 aaPredicted RBP14.86□□□□□ -0.03
PNKP-218ENST00000625299 ARHGEF2Q92974 986 aaKnown RBP14.86□□□□□ -0.03
PNKP-218ENST00000625299 USP7Q93009 1102 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 NT5C3BQ969T7 300 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 ISG20Q96AZ6 181 aaKnown RBP14.86□□□□□ -0.03
PNKP-218ENST00000625299 HAPLN3Q96S86 360 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 NDFIP2Q9NV92 336 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 KLQ9UEF7 1012 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 SEPT3Q9UH03 358 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 DNAI1Q9UI46 699 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 AJAP1Q9UKB5 411 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms