RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 KBTBD12Q3ZCT8 623 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 ANKRD20A4Q4UJ75 823 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 TNFAIP8L3Q5GJ75 292 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 PITRM1Q5JRX3 1037 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 PKN3Q6P5Z2 889 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 TAOK1Q7L7X3 1001 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 KDELC2Q7Z4H8 507 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 TMEM135Q86UB9 458 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 LRRC6Q86X45 466 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 CNPY4Q8N129 248 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 SH2D3CQ8N5H7 860 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 SLC25A41Q8N5S1 370 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 ARFGAP2Q8N6H7 521 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.07□□□□□ -1.28
CBWD3-219ENST00000622817 PPHLN1Q8NEY8 458 aaKnown RBP7.07□□□□□ -1.28
CBWD3-219ENST00000622817 ATP2A3Q93084 1043 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 TTC17Q96AE7 1141 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 RSPRY1Q96DX4 576 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 PAFAH2Q99487 392 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 S1PR5Q9H228 398 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 MRM3Q9HC36 420 aaKnown RBP7.07□□□□□ -1.28
CBWD3-219ENST00000622817 ZFP14Q9HCL3 533 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 EURLQ9NYK6 297 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 MOCS1Q9NZB8 636 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 CLEC1BQ9P126 229 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 LHX3Q9UBR4 397 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 TSR3Q9UJK0 312 aaKnown RBP7.07□□□□□ -1.28
CBWD3-219ENST00000622817 INTS6Q9UL03 887 aaKnown RBP7.07□□□□□ -1.28
CBWD3-219ENST00000622817 RPS6KL1Q9Y6S9 549 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 FAM169AQ9Y6X4 670 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 C2orf16Q68DN1 1984 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 HEPACAM2A8MVW5 462 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 HOXC11O43248 304 aaPredicted RBP7.07□□□□□ -1.28
CBWD3-219ENST00000622817 NDST3O95803 873 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 MT-CO1P00395 513 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 FGF1P05230 155 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 INHBAP08476 426 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 POU3F3P20264 500 aaPredicted RBP7.07□□□□□ -1.28
CBWD3-219ENST00000622817 NR1D1P20393 614 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 ADRA1DP25100 572 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 MTHFRP42898 656 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 CHRNA4P43681 627 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 MAPK8P45983 427 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 RGRP47804 291 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 CSNK1DP48730 415 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 AP1S1P61966 158 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 CBX1P83916 185 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 MGAT5Q09328 741 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 NAB1Q13506 487 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 IHHQ14623 411 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 POU6F1Q14863 301 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 EFTUD2Q15029 972 aaKnown RBP eCLIP7.07□□□□□ -1.28
CBWD3-219ENST00000622817 TMED2Q15363 201 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 CTC1Q2NKJ3 1217 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 FUT11Q495W5 492 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 SIRPB2Q5JXA9 342 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 LGSNQ5TDP6 509 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 EMC10Q5UCC4 262 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 NLRP9Q7RTR0 991 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 SLC26A11Q86WA9 606 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 CTAGE3PQ8IX95 158 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.07□□□□□ -1.28
CBWD3-219ENST00000622817 DCAKDQ8WVC6 231 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 SLC44A1Q8WWI5 657 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 CDKL2Q92772 493 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 ISG20Q96AZ6 181 aaKnown RBP7.07□□□□□ -1.28
CBWD3-219ENST00000622817 ZNF669Q96BR6 464 aaPredicted RBP7.07□□□□□ -1.28
CBWD3-219ENST00000622817 MRRFQ96E11 262 aaKnown RBP7.07□□□□□ -1.28
CBWD3-219ENST00000622817 RANBP9Q96S59 729 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 TRIM56Q9BRZ2 755 aaKnown RBP7.07□□□□□ -1.28
CBWD3-219ENST00000622817 REPIN1Q9BWE0 567 aaKnown RBP7.07□□□□□ -1.28
CBWD3-219ENST00000622817 PPANQ9NQ55 473 aaKnown RBP7.07□□□□□ -1.28
CBWD3-219ENST00000622817 CHRAC1Q9NRG0 131 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 PRKAG3Q9UGI9 489 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 TBK1Q9UHD2 729 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 SLC25A13Q9UJS0 675 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 FBXO10Q9UK96 956 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 HS3ST2Q9Y278 367 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 FCF1Q9Y324 198 aaKnown RBP7.07□□□□□ -1.28
CBWD3-219ENST00000622817 ACTL7BQ9Y614 415 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 MTCH2Q9Y6C9 303 aa7.07□□□□□ -1.28
CBWD3-219ENST00000622817 RANBP2P49792 3224 aaKnown RBP7.06□□□□□ -1.28
CBWD3-219ENST00000622817 PRRC2BQ5JSZ5 2229 aaKnown RBP7.06□□□□□ -1.28
CBWD3-219ENST00000622817 ZCWPW2A0A1B0GU75 182 aa7.06□□□□□ -1.28
CBWD3-219ENST00000622817 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.06□□□□□ -1.28
CBWD3-219ENST00000622817 HEATR9A2RTY3 570 aa7.06□□□□□ -1.28
CBWD3-219ENST00000622817 K7ERQ8 282 aa7.06□□□□□ -1.28
CBWD3-219ENST00000622817 SMAD6O43541 496 aaKnown RBP7.06□□□□□ -1.28
CBWD3-219ENST00000622817 GJB3O75712 270 aa7.06□□□□□ -1.28
CBWD3-219ENST00000622817 IGSF6O95976 241 aa7.06□□□□□ -1.28
CBWD3-219ENST00000622817 C1QAP02745 245 aa7.06□□□□□ -1.28
CBWD3-219ENST00000622817 ATXN1LP0C7T5 689 aaKnown RBP7.06□□□□□ -1.28
CBWD3-219ENST00000622817 ALADP13716 330 aa7.06□□□□□ -1.28
CBWD3-219ENST00000622817 POLR2EP19388 210 aaKnown RBP7.06□□□□□ -1.28
CBWD3-219ENST00000622817 FCARP24071 287 aa7.06□□□□□ -1.28
CBWD3-219ENST00000622817 HPDP32754 393 aaPredicted RBP7.06□□□□□ -1.28
CBWD3-219ENST00000622817 PPP2R2AP63151 447 aa7.06□□□□□ -1.28
CBWD3-219ENST00000622817 ECT2LQ008S8 904 aa7.06□□□□□ -1.28
CBWD3-219ENST00000622817 SEPT6Q14141 434 aa7.06□□□□□ -1.28
CBWD3-219ENST00000622817 TRIM68Q6AZZ1 485 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms