RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 PSMD5Q16401 504 aa16.27■□□□□ 0.2
GABRB3-215ENST00000622697 FAM9CQ8IZT9 166 aa16.27■□□□□ 0.2
GABRB3-215ENST00000622697 PCDH19Q8TAB3 1148 aa16.27■□□□□ 0.2
GABRB3-215ENST00000622697 AP4B1Q9Y6B7 739 aa16.27■□□□□ 0.2
GABRB3-215ENST00000622697 AK5Q9Y6K8 562 aa16.27■□□□□ 0.2
GABRB3-215ENST00000622697 CAPN8A6NHC0 703 aa16.27■□□□□ 0.19
GABRB3-215ENST00000622697 C2CD4BA6NLJ0 364 aa16.27■□□□□ 0.19
GABRB3-215ENST00000622697 MMP3P08254 477 aa16.27■□□□□ 0.19
GABRB3-215ENST00000622697 TPSB2P20231 275 aa16.27■□□□□ 0.19
GABRB3-215ENST00000622697 TPSAB1Q15661 275 aa16.27■□□□□ 0.19
GABRB3-215ENST00000622697 RNF220Q5VTB9 566 aa16.27■□□□□ 0.19
GABRB3-215ENST00000622697 RBM44Q6ZP01 1051 aaKnown RBP16.27■□□□□ 0.19
GABRB3-215ENST00000622697 MARK2Q7KZI7 788 aaKnown RBP16.27■□□□□ 0.19
GABRB3-215ENST00000622697 ZNF567Q8N184 647 aa16.27■□□□□ 0.19
GABRB3-215ENST00000622697 TOP6BLQ8N6T0 577 aa16.27■□□□□ 0.19
GABRB3-215ENST00000622697 PLEKHO2Q8TD55 490 aa16.27■□□□□ 0.19
GABRB3-215ENST00000622697 AAASQ9NRG9 546 aa16.27■□□□□ 0.19
GABRB3-215ENST00000622697 ZNHIT2Q9UHR6 403 aa16.27■□□□□ 0.19
GABRB3-215ENST00000622697 TDRKHQ9Y2W6 561 aaKnown RBP16.27■□□□□ 0.19
GABRB3-215ENST00000622697 VWA7Q9Y334 891 aa16.27■□□□□ 0.19
GABRB3-215ENST00000622697 USP50Q70EL3 339 aaPredicted RBP16.27■□□□□ 0.19
GABRB3-215ENST00000622697 HEATR4Q86WZ0 1026 aa16.27■□□□□ 0.19
GABRB3-215ENST00000622697 CAMK1DQ8IU85 385 aa16.27■□□□□ 0.19
GABRB3-215ENST00000622697 ARHGEF4Q9NR80 690 aa16.27■□□□□ 0.19
GABRB3-215ENST00000622697 MYH2Q9UKX2 1941 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 A0A087WXM4 84 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 LGR5O75473 907 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 USP2O75604 605 aaPredicted RBP16.26■□□□□ 0.19
GABRB3-215ENST00000622697 DLG2Q15700 870 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 FAM126AQ9BYI3 521 aaPredicted RBP16.26■□□□□ 0.19
GABRB3-215ENST00000622697 SLC7A5P2Q9GIP4 190 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 NRXN3Q9Y4C0 1643 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 CABYRO75952 493 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 RPLP2P05387 115 aaKnown RBP16.26■□□□□ 0.19
GABRB3-215ENST00000622697 DARSP14868 501 aaKnown RBP16.26■□□□□ 0.19
GABRB3-215ENST00000622697 ZNF460Q14592 562 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 GRM3Q14832 879 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 SLC10A6Q3KNW5 377 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 GCNT7Q6ZNI0 430 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 SAPCD2Q86UD0 394 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 ZNF513Q8N8E2 541 aaPredicted RBP16.26■□□□□ 0.19
GABRB3-215ENST00000622697 SELENOMQ8WWX9 145 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 QKIQ96PU8 341 aaKnown RBP eCLIP16.26■□□□□ 0.19
GABRB3-215ENST00000622697 NTPCRQ9BSD7 190 aaKnown RBP16.26■□□□□ 0.19
GABRB3-215ENST00000622697 MLPHQ9BV36 600 aaPredicted RBP16.26■□□□□ 0.19
GABRB3-215ENST00000622697 RHOJQ9H4E5 214 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 ZDHHC6Q9H6R6 413 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 GLOD4Q9HC38 313 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 ZNF541Q9H0D2 1346 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 C9JVG2 144 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 TP53BP2Q13625 1128 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 MTX3Q5HYI7 312 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 CUZD1Q86UP6 607 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 SYT12Q8IV01 421 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 OR6K2Q8NGY2 324 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 GRIN3AQ8TCU5 1115 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 MCOLN3Q8TDD5 553 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 SOCS4Q8WXH5 440 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 CADM1Q9BY67 442 aaKnown RBP16.26■□□□□ 0.19
GABRB3-215ENST00000622697 C6orf62Q9GZU0 229 aaPredicted RBP16.26■□□□□ 0.19
GABRB3-215ENST00000622697 TMEM59LQ9UK28 342 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 OR56A5P0C7T3 313 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 RHBDF2Q6PJF5 856 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 TRIM69Q86WT6 500 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 KRT84Q9NSB2 600 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 DAPK2Q9UIK4 370 aa16.26■□□□□ 0.19
GABRB3-215ENST00000622697 A0A1W2PQH9 124 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 DHX15O43143 795 aaKnown RBP16.25■□□□□ 0.19
GABRB3-215ENST00000622697 KCNH1O95259 989 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 OCM2P0CE71 109 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 OCMP0CE72 109 aaPredicted RBP16.25■□□□□ 0.19
GABRB3-215ENST00000622697 IMPDH2P12268 514 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 RPL38P63173 70 aaKnown RBP16.25■□□□□ 0.19
GABRB3-215ENST00000622697 RALGPS1Q5JS13 557 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 B3GNT6Q6ZMB0 384 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 OR8H2Q8N162 312 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 TMEM132CQ8N3T6 1108 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 AGAP2Q99490 1192 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 TMEM216Q9P0N5 145 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 MANSC4A6NHS7 340 aaPredicted RBP16.25■□□□□ 0.19
GABRB3-215ENST00000622697 CD3EAPO15446 510 aaKnown RBP16.25■□□□□ 0.19
GABRB3-215ENST00000622697 WFS1O76024 890 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 IGSF6O95976 241 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 S100A14Q9HCY8 104 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 MT-CYBP00156 380 aaPredicted RBP16.25■□□□□ 0.19
GABRB3-215ENST00000622697 CSH1P0DML2 217 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 CSH2P0DML3 217 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 SP2Q02086 613 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 GAD2Q05329 585 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 RIPK1Q13546 671 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 BANPQ8N9N5 519 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 STN1Q9H668 368 aaKnown RBP16.25■□□□□ 0.19
GABRB3-215ENST00000622697 TRAF6Q9Y4K3 522 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 SPEF2Q9C093 1822 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 CNOT3O75175 753 aaKnown RBP16.25■□□□□ 0.19
GABRB3-215ENST00000622697 HK2P52789 917 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 BTG3Q14201 252 aaPredicted RBP16.25■□□□□ 0.19
GABRB3-215ENST00000622697 ACOX1Q15067 660 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 SIAH1Q8IUQ4 282 aa16.25■□□□□ 0.19
GABRB3-215ENST00000622697 PARP8Q8N3A8 854 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms