RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 CATSPERBQ9H7T0 1116 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 SYBUQ9NX95 663 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 KCTD5Q9NXV2 234 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 SHROOM3Q8TF72 1996 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 ARHGAP33O14559 1287 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 NDC80O14777 642 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 IGLV3-27P01718 113 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 MAPK1P28482 360 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 PHBP35232 272 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 FDFT1P37268 417 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 SGSHP51688 502 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 RPS24P62847 133 aaKnown RBP11.51□□□□□ -0.57
TP53-226ENST00000620739 RIPK1Q13546 671 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 LAPTM5Q13571 262 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 CRTC2Q53ET0 693 aaPredicted RBP11.51□□□□□ -0.57
TP53-226ENST00000620739 PPP1R21Q6ZMI0 780 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 TMEM150AQ86TG1 271 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 DDX53Q86TM3 631 aaKnown RBP11.51□□□□□ -0.57
TP53-226ENST00000620739 SCAIQ8N9R8 606 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 FLCNQ8NFG4 579 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 AGAP11Q8TF27 550 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 C2orf15Q8WU43 125 aaKnown RBP11.51□□□□□ -0.57
TP53-226ENST00000620739 ATXN2LQ8WWM7 1075 aaKnown RBP11.51□□□□□ -0.57
TP53-226ENST00000620739 SCG3Q8WXD2 468 aaKnown RBP11.51□□□□□ -0.57
TP53-226ENST00000620739 PSMG2Q969U7 264 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 IFT43Q96FT9 208 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 ZNF778Q96MU6 729 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 FERMT1Q9BQL6 677 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 ZYG11BQ9C0D3 744 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 ZNF334Q9HCZ1 680 aaPredicted RBP11.51□□□□□ -0.57
TP53-226ENST00000620739 IL23AQ9NPF7 189 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 MRPL17Q9NRX2 175 aaKnown RBP11.51□□□□□ -0.57
TP53-226ENST00000620739 INTS9Q9NV88 658 aaKnown RBP11.51□□□□□ -0.57
TP53-226ENST00000620739 IGSF9Q9P2J2 1179 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 CEP290O15078 2479 aa11.51□□□□□ -0.57
TP53-226ENST00000620739 A0A0D9SEW6 157 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 FGBP02675 491 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 SLC2A3P11169 496 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 GJA1P17302 382 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 LAG3P18627 525 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 KRT4P19013 534 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 ACVRL1P37023 503 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 MSH2P43246 934 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 SLC10A7Q0GE19 358 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 TAF11Q15544 211 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 SPRED3Q2MJR0 410 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 FOXB2Q5VYV0 432 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 CHSY1Q86X52 802 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 CMTR2Q8IYT2 770 aaKnown RBP11.5□□□□□ -0.57
TP53-226ENST00000620739 DNAAF3Q8N9W5 541 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 ATP2A3Q93084 1043 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 TCF7L2Q9NQB0 619 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 HSFX1Q9UBD0 423 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 IPO11Q9UI26 975 aaKnown RBP11.5□□□□□ -0.57
TP53-226ENST00000620739 DNMT3LQ9UJW3 386 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 FGF10O15520 208 aaPredicted RBP11.5□□□□□ -0.57
TP53-226ENST00000620739 TGM5O43548 720 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 TSPAN3O60637 253 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 CSH1P0DML2 217 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 CSH2P0DML3 217 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 CD53P19397 219 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 TSPAN7P41732 249 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 TBL3Q12788 808 aaKnown RBP11.5□□□□□ -0.57
TP53-226ENST00000620739 RAB33AQ14088 237 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 IHHQ14623 411 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 KCTD11Q693B1 232 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 TXNDC8Q6A555 127 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 ADGRD1Q6QNK2 874 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 C4orf22Q6V702 233 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 CROCCP2Q86T23 111 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 JAZF1Q86VZ6 243 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 LGI2Q8N0V4 545 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 ATP6V0D2Q8N8Y2 350 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 PABPC5Q96DU9 382 aaKnown RBP11.5□□□□□ -0.57
TP53-226ENST00000620739 CYTH2Q99418 400 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 TRABDQ9H4I3 376 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 TRPC7Q9HCX4 862 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 OLA1Q9NTK5 396 aaKnown RBP11.5□□□□□ -0.57
TP53-226ENST00000620739 RBM22Q9NW64 420 aaKnown RBP eCLIP11.5□□□□□ -0.57
TP53-226ENST00000620739 PSMC3IPQ9P2W1 217 aaPredicted RBP11.5□□□□□ -0.57
TP53-226ENST00000620739 FADS3Q9Y5Q0 445 aa11.5□□□□□ -0.57
TP53-226ENST00000620739 A6NNZ2 444 aa11.49□□□□□ -0.57
TP53-226ENST00000620739 AP3B1O00203 1094 aa11.49□□□□□ -0.57
TP53-226ENST00000620739 HLA-DQB2P05538 268 aa11.49□□□□□ -0.57
TP53-226ENST00000620739 MYOGP15173 224 aa11.49□□□□□ -0.57
TP53-226ENST00000620739 ATP2A2P16615 1042 aaKnown RBP11.49□□□□□ -0.57
TP53-226ENST00000620739 MZF1P28698 734 aaPredicted RBP11.49□□□□□ -0.57
TP53-226ENST00000620739 OR1E1P30953 314 aa11.49□□□□□ -0.57
TP53-226ENST00000620739 RPA3P35244 121 aaPredicted RBP11.49□□□□□ -0.57
TP53-226ENST00000620739 SCTRP47872 440 aa11.49□□□□□ -0.57
TP53-226ENST00000620739 ERVFC1P60507 584 aa11.49□□□□□ -0.57
TP53-226ENST00000620739 BMPR2Q13873 1038 aa11.49□□□□□ -0.57
TP53-226ENST00000620739 TUBB8Q3ZCM7 444 aa11.49□□□□□ -0.57
TP53-226ENST00000620739 FAM133BQ5BKY9 247 aaKnown RBP11.49□□□□□ -0.57
TP53-226ENST00000620739 HECTD3Q5T447 861 aa11.49□□□□□ -0.57
TP53-226ENST00000620739 LRRC8BQ6P9F7 803 aa11.49□□□□□ -0.57
TP53-226ENST00000620739 TMEM154Q6P9G4 183 aa11.49□□□□□ -0.57
TP53-226ENST00000620739 NLRP9Q7RTR0 991 aa11.49□□□□□ -0.57
TP53-226ENST00000620739 TMC7Q7Z402 723 aa11.49□□□□□ -0.57
TP53-226ENST00000620739 GALNT6Q8NCL4 622 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms