RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 ADGRG1Q9Y653 693 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 GON4LQ3T8J9 2241 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 PI4KAP42356 2102 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 TBC1D3DA0A087WVF3 549 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 TBC1D3IA0A087WXS9 549 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 TBC1D3EA0A087X179 549 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 TBC1D3KA0A087X1G2 549 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 A0A0U1RQJ8 604 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 A0A1W2PQU0 124 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 LRRD1A4D1F6 860 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 GRID2IPA4D2P6 1211 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 CFAP69A5D8W1 941 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 TBC1D3FA6NER0 549 aaPredicted RBP8.34□□□□□ -1.07
NEK3-209ENST00000618856 TBC1D3LB9A6J9 549 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 PRAMEF26H0Y7S4 382 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 ARHGAP6O43182 974 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 SPOPO43791 374 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 SOCS5O75159 536 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 IPO7O95373 1038 aaKnown RBP8.34□□□□□ -1.07
NEK3-209ENST00000618856 SYPP08247 313 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 TBC1D3HP0C7X1 549 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 ZFXP17010 805 aaPredicted RBP8.34□□□□□ -1.07
NEK3-209ENST00000618856 MX2P20592 715 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 CTSKP43235 329 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 ID4P47928 161 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 MARCKSL1P49006 195 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 NR2C2P49116 596 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 IFI35P80217 286 aaPredicted RBP8.34□□□□□ -1.07
NEK3-209ENST00000618856 CCZ1BP86790 482 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 CCZ1P86791 482 aaPredicted RBP8.34□□□□□ -1.07
NEK3-209ENST00000618856 ADCY2Q08462 1091 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 OVGP1Q12889 678 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 GRIK2Q13002 908 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 SLC14A1Q13336 389 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 FGL2Q14314 439 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 PUM1Q14671 1186 aaKnown RBP eCLIP8.34□□□□□ -1.07
NEK3-209ENST00000618856 PPP2R5EQ16537 467 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 UGP2Q16851 508 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 ZNF423Q2M1K9 1284 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 POM121L1PQ3SYA9 428 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 TMEM52BQ4KMG9 183 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 AASDHQ4L235 1098 aaPredicted RBP8.34□□□□□ -1.07
NEK3-209ENST00000618856 MARC1Q5VT66 337 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 TBC1D3GQ6DHY5 549 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 TBC1D3CQ6IPX1 549 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 NAPEPLDQ6IQ20 393 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 TIGD7Q6NT04 549 aaPredicted RBP8.34□□□□□ -1.07
NEK3-209ENST00000618856 FBXL19Q6PCT2 694 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 BRAT1Q6PJG6 821 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 IL27RAQ6UWB1 636 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 SPOCD1Q6ZMY3 1216 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 PIP4P1Q86T03 277 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 NT5DC3Q86UY8 548 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 ZNF354CQ86Y25 554 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 CAMK1DQ8IU85 385 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 LRRC8AQ8IWT6 810 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 RCOR2Q8IZ40 523 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 TBC1D3Q8IZP1 549 aaPredicted RBP8.34□□□□□ -1.07
NEK3-209ENST00000618856 CBARPQ8N350 705 aaPredicted RBP8.34□□□□□ -1.07
NEK3-209ENST00000618856 RNF10Q8N5U6 811 aaKnown RBP8.34□□□□□ -1.07
NEK3-209ENST00000618856 MFSD2AQ8NA29 543 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 CCDC112Q8NEF3 446 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 UBE2Q2Q8WVN8 375 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 KRT35Q92764 455 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 EXOC2Q96KP1 924 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 SLC6A18Q96N87 628 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 PHF12Q96QT6 1004 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 KLF6Q99612 283 aaPredicted RBP8.34□□□□□ -1.07
NEK3-209ENST00000618856 IL12RB2Q99665 862 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 CINPQ9BW66 212 aaPredicted RBP8.34□□□□□ -1.07
NEK3-209ENST00000618856 BRD8Q9H0E9 1235 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 ATP13A3Q9H7F0 1226 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 GRPEL1Q9HAV7 217 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 NOD2Q9HC29 1040 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 TMEM9BQ9NQ34 198 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 FSCN3Q9NQT6 498 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 DYRK4Q9NR20 520 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 ATP8A1Q9Y2Q0 1164 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 PPIL1Q9Y3C6 166 aa8.34□□□□□ -1.07
NEK3-209ENST00000618856 hCG_1818297A0A087WSY0 165 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.33□□□□□ -1.08
NEK3-209ENST00000618856 A0A1W2PQ67 120 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 CCDC66A2RUB6 948 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 FAM47DPA6NHR8 397 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 C4orf47A7E2U8 309 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 RIOK3O14730 519 aaKnown RBP8.33□□□□□ -1.08
NEK3-209ENST00000618856 APOL1O14791 398 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 ZRANB2O95218 330 aaKnown RBP eCLIP8.33□□□□□ -1.08
NEK3-209ENST00000618856 PIGNO95427 931 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 KRT1P04264 644 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 CFIP05156 583 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 CES1P23141 567 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 CD38P28907 300 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 SERPINA4P29622 427 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 GJC1P36383 396 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 MMP13P45452 471 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 CSNK1EP49674 416 aaKnown RBP8.33□□□□□ -1.08
NEK3-209ENST00000618856 NXPH1P58417 271 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 COPS2P61201 443 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 RPS21P63220 83 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms