RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 VILLO15195 856 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 PCDH8O95206 1070 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 TNNT1P13805 278 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 CR2P20023 1033 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 SLC1A1P43005 524 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 NOP2P46087 812 aaKnown RBP12.89□□□□□ -0.35
CD9-212ENST00000610354 MARCKSL1P49006 195 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 NSUN2Q08J23 767 aaKnown RBP eCLIP12.89□□□□□ -0.35
CD9-212ENST00000610354 IHHQ14623 411 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 SPA17Q15506 151 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 PRAMEF14Q5SWL7 426 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 TMCO4Q5TGY1 634 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 NAPEPLDQ6IQ20 393 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 NEK5Q6P3R8 708 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 PRPF39Q86UA1 669 aaKnown RBP12.89□□□□□ -0.35
CD9-212ENST00000610354 SPATS2Q86XZ4 545 aaKnown RBP12.89□□□□□ -0.35
CD9-212ENST00000610354 PLD5Q8N7P1 536 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 TPCN2Q8NHX9 752 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 RNF25Q96BH1 459 aaPredicted RBP12.89□□□□□ -0.35
CD9-212ENST00000610354 BAG1Q99933 345 aaPredicted RBP12.89□□□□□ -0.35
CD9-212ENST00000610354 CINPQ9BW66 212 aaPredicted RBP12.89□□□□□ -0.35
CD9-212ENST00000610354 ZDHHC5Q9C0B5 715 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 SUV39H2Q9H5I1 410 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 GAREM1Q9H706 876 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 CAAP1Q9H8G2 361 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 FZD3Q9NPG1 666 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 AASDHPPTQ9NRN7 309 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 NCOR2Q9Y618 2525 aa12.89□□□□□ -0.35
CD9-212ENST00000610354 MED19A0JLT2 244 aaPredicted RBP12.88□□□□□ -0.35
CD9-212ENST00000610354 H0Y8X5 98 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 TRAFD1O14545 582 aaPredicted RBP12.88□□□□□ -0.35
CD9-212ENST00000610354 RAD51BO15315 384 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 SLC31A1O15431 190 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 PJA2O43164 708 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 OPHN1O60890 802 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 KRT1P04264 644 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 CD38P28907 300 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 SERPINB6P35237 376 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 GARSP41250 739 aaKnown RBP12.88□□□□□ -0.35
CD9-212ENST00000610354 ATXN3P54252 364 aaPredicted RBP12.88□□□□□ -0.35
CD9-212ENST00000610354 RAD51Q06609 339 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 SHBQ15464 509 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 TEAD4Q15561 434 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 TAZQ16635 292 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 ZNF423Q2M1K9 1284 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 SLC9A4Q6AI14 798 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 MFSD7Q6UXD7 560 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 NPNTQ6UXI9 565 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 MAP7D3Q8IWC1 876 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 RHOT1Q8IXI2 618 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 ATPAF2Q8N5M1 289 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 TEX26Q8N6G2 289 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 TMEM145Q8NBT3 493 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 MYOCQ99972 504 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 C1QTNF2Q9BXJ5 285 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 DTLQ9NZJ0 730 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 SEPT3Q9UH03 358 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 TPX2Q9ULW0 747 aaKnown RBP12.88□□□□□ -0.35
CD9-212ENST00000610354 DMTF1Q9Y222 760 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 TDRD6O60522 2096 aaKnown RBP12.88□□□□□ -0.35
CD9-212ENST00000610354 ARID1BQ8NFD5 2236 aaPredicted RBP12.88□□□□□ -0.35
CD9-212ENST00000610354 IGLON5A6NGN9 336 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 UPK3BL1B0FP48 263 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 ZNF487B1APH4 448 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 UPK3BL2E5RIL1 263 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 SPOPO43791 374 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 KCNK5O95279 499 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 PRKCGP05129 697 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 SCNN1BP51168 640 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 CLDN2P57739 230 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 NXPH1P58417 271 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 MAXP61244 160 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 SEMG2Q02383 582 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 ADCY2Q08462 1091 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 CCDC15Q0P6D6 951 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 GSE1Q14687 1217 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 SETMARQ53H47 684 aaPredicted RBP12.88□□□□□ -0.35
CD9-212ENST00000610354 PPM1JQ5JR12 505 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 ZFYVE27Q5T4F4 411 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 C11orf63Q6NUN7 778 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 KDM7AQ6ZMT4 941 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 DBX2Q6ZNG2 339 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 GCNT7Q6ZNI0 430 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 TTC7BQ86TV6 843 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 VSIG1Q86XK7 387 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 DEFB124Q8NES8 71 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 HCAR2Q8TDS4 363 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 MAML1Q92585 1016 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 KRT35Q92764 455 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 RAB7BQ96AH8 199 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 ECHDC3Q96DC8 303 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 FEM1CQ96JP0 617 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 BMFQ96LC9 184 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 ZNF641Q96N77 438 aaPredicted RBP12.88□□□□□ -0.35
CD9-212ENST00000610354 CAMK1GQ96NX5 476 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 TSGA13Q96PP4 275 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 TUBGCP5Q96RT8 1024 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 KLF6Q99612 283 aaPredicted RBP12.88□□□□□ -0.35
CD9-212ENST00000610354 MGME1Q9BQP7 344 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 DESI2Q9BSY9 194 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms