RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 ASB12Q8WXK4 309 aa14.45□□□□□ -0.1
HDDC2-209ENST00000609477 RBM41Q96IZ5 413 aaKnown RBP14.45□□□□□ -0.1
HDDC2-209ENST00000609477 KLHL11Q9NVR0 708 aa14.45□□□□□ -0.1
HDDC2-209ENST00000609477 FADS3Q9Y5Q0 445 aa14.45□□□□□ -0.1
HDDC2-209ENST00000609477 PCDH15Q96QU1 1955 aa14.45□□□□□ -0.1
HDDC2-209ENST00000609477 CCDC66A2RUB6 948 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 UPK3BL1B0FP48 263 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 UPK3BL2E5RIL1 263 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 VILLO15195 856 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 SOCS5O75159 536 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 PCDH8O95206 1070 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 CER1O95813 267 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 ZNF883P0CG24 379 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 NFKBIAP25963 317 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 CD38P28907 300 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 GKP32189 559 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 CDKN2BP42772 138 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 MMP13P45452 471 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 COPS2P61201 443 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 BCL2L1Q07817 233 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 PDK1Q15118 436 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 TMEM259Q4ZIN3 620 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 TFDP3Q5H9I0 405 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 NAPEPLDQ6IQ20 393 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 PLD5Q8N7P1 536 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 MFSD2AQ8NA29 543 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 ACRBPQ8NEB7 543 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 MAML1Q92585 1016 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 RMDN1Q96DB5 314 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 SERAC1Q96JX3 654 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 NUDCD1Q96RS6 583 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 MGME1Q9BQP7 344 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 TSGA10Q9BZW7 698 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 LACRTQ9GZZ8 138 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 GRPEL1Q9HAV7 217 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 RXFP3Q9NSD7 469 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 DNAAF2Q9NVR5 837 aaKnown RBP14.44□□□□□ -0.1
HDDC2-209ENST00000609477 DTLQ9NZJ0 730 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 SALL4Q9UJQ4 1053 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 TFR2Q9UP52 801 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 EFR3BQ9Y2G0 817 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 PCDHA3Q9Y5H8 950 aa14.44□□□□□ -0.1
HDDC2-209ENST00000609477 A0A1W2PQU0 124 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 GOLGA6L3A6NEY3 463 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 RNF103O00237 685 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 TM4SF5O14894 197 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 AREL1O15033 823 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 CR2P20023 1033 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 XPAP23025 273 aaPredicted RBP14.43□□□□□ -0.1
HDDC2-209ENST00000609477 CTNNA1P35221 906 aaKnown RBP14.43□□□□□ -0.1
HDDC2-209ENST00000609477 CSNK1EP49674 416 aaKnown RBP14.43□□□□□ -0.1
HDDC2-209ENST00000609477 SCNN1BP51168 640 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 PPP2CBP62714 309 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 PPP2CAP67775 309 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 PPIDQ08752 370 aaKnown RBP14.43□□□□□ -0.1
HDDC2-209ENST00000609477 GRIK2Q13002 908 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 PPP2R5EQ16537 467 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 UGP2Q16851 508 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 ZNF284Q2VY69 593 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 CFAP58Q5T655 872 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 ALG1LQ6GMV1 187 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 MFSD7Q6UXD7 560 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 ADAT2Q7Z6V5 191 aaKnown RBP14.43□□□□□ -0.1
HDDC2-209ENST00000609477 NETO2Q8NC67 525 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 RNF25Q96BH1 459 aaPredicted RBP14.43□□□□□ -0.1
HDDC2-209ENST00000609477 ECHDC3Q96DC8 303 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 EXOC2Q96KP1 924 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 LENG8Q96PV6 779 aaPredicted RBP14.43□□□□□ -0.1
HDDC2-209ENST00000609477 EBF2Q9HAK2 575 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 HS3ST3A1Q9Y663 406 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 DUSP10Q9Y6W6 482 aa14.43□□□□□ -0.1
HDDC2-209ENST00000609477 CFAP69A5D8W1 941 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 C4orf47A7E2U8 309 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 MIF4GDA9UHW6 222 aaKnown RBP14.42□□□□□ -0.1
HDDC2-209ENST00000609477 NEMP1O14524 444 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 PPP1R12AO14974 1030 aaPredicted RBP14.42□□□□□ -0.1
HDDC2-209ENST00000609477 INSIG1O15503 277 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 KRT86O43790 486 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 OPHN1O60890 802 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 CCNB1P14635 433 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 TIMP2P16035 220 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 TGM2P21980 687 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 HNRNPA2B1P22626 353 aaKnown RBP14.42□□□□□ -0.1
HDDC2-209ENST00000609477 CTNNA2P26232 953 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 CETN2P41208 172 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 C21orf59P57076 290 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 GBE1Q04446 702 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 SLC10A2Q12908 348 aaPredicted RBP14.42□□□□□ -0.1
HDDC2-209ENST00000609477 STAT4Q14765 748 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 ERAP2Q6P179 960 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 SPOCD1Q6ZMY3 1216 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 ZNF662Q6ZS27 426 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 RFX6Q8HWS3 928 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 LRRC8AQ8IWT6 810 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 CCDC13Q8IYE1 715 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 MINDY1Q8N5J2 469 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 LRRC57Q8N9N7 239 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 CCNYQ8ND76 341 aa14.42□□□□□ -0.1
HDDC2-209ENST00000609477 GTPBP2Q9BX10 602 aaKnown RBP14.42□□□□□ -0.1
HDDC2-209ENST00000609477 C1QTNF2Q9BXJ5 285 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms