RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 RBFAQ8N0V3 343 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 HIC2Q96JB3 615 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 GDAP1L1Q96MZ0 367 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 MBNL1Q9NR56 388 aaKnown RBP13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 FANCLQ9NW38 375 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 SPASTQ9UBP0 616 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 PNMA8BQ9ULN7 279 aaPredicted RBP13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 SIK3Q9Y2K2 1263 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 TEX51A0A1B0GUA7 166 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 CREB3O43889 395 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 DXOO77932 396 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 IGSF6O95976 241 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 CALB1P05937 261 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 EPHB2P29323 1055 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 IGFALSP35858 605 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 EIF4A3P38919 411 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 GSCP56915 257 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 YBEYP58557 167 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 ERVPABLB-1P60509 514 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 RHOAP61586 193 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 YPEL5P62699 121 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 NR0B2Q15466 257 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 KLHL40Q2TBA0 621 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 INO80DQ53TQ3 878 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 PRRT3Q5FWE3 981 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 PERM1Q5SV97 790 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 FAXCQ5TGI0 409 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 CRTC1Q6UUV9 634 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 PHF13Q86YI8 300 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 PHACTR4Q8IZ21 702 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 RTL3Q8N8U3 475 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 LSM14AQ8ND56 463 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 C3orf20Q8ND61 904 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 CXorf40AQ8TE69 158 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 CASKIN2Q8WXE0 1202 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 PCMTD1Q96MG8 357 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 CLPBQ9H078 707 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 NCKIPSDQ9NZQ3 722 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 APOBEC3BQ9UH17 382 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 MFHAS1Q9Y4C4 1052 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 DAAM1Q9Y4D1 1078 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 RP1P56715 2156 aa13.55□□□□□ -0.24
POLR2J3-219ENST00000608621 RASA4BC9J798 803 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 MUSKO15146 869 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 YY2O15391 372 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 INSIG1O15503 277 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 CCP110O43303 1012 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 RASA4O43374 803 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 C1QL1O75973 258 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 ANXA6P08133 673 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 COPB1P53618 953 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 SYCP1Q15431 976 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 CYTH1Q15438 398 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 TMEM52BQ4KMG9 183 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 C3orf38Q5JPI3 329 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 EFHC2Q5JST6 749 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 SLC35F3Q8IY50 421 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 TP53I13Q8NBR0 393 aaPredicted RBP13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 NEK11Q8NG66 645 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 TPCN2Q8NHX9 752 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 GLMNQ92990 594 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 HMCESQ96FZ2 354 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 ATXN7L3BQ96GX2 97 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 EPAS1Q99814 870 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 WRAP53Q9BUR4 548 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 BOCQ9BWV1 1114 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 CPEB1Q9BZB8 566 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 SLC13A1Q9BZW2 595 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 ASCL3Q9NQ33 180 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 LMBRD1Q9NUN5 540 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 SEPT11Q9NVA2 429 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 DKK3Q9UBP4 350 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 FZD10Q9ULW2 581 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 SATB2Q9UPW6 733 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 COQ6Q9Y2Z9 468 aa13.54□□□□□ -0.24
POLR2J3-219ENST00000608621 A0A1W2PNU3 283 aaPredicted RBP13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 TCRBV5S1A1TA0A578 114 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 WASH4PA8MWX3 477 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 LMO7DNF2Z398 122 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 TOR1BO14657 336 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 RIOK3O14730 519 aaKnown RBP13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 CASC3O15234 703 aaKnown RBP13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 LZTS3O60299 673 aaPredicted RBP13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 TSHRP16473 764 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 XPAP23025 273 aaPredicted RBP13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 RPIAP49247 311 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 ZNF143P52747 638 aaPredicted RBP13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 RPL7AP62424 266 aaKnown RBP13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 PPARDQ03181 441 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 SERINC3Q13530 473 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 BROXQ5VW32 411 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 MON1BQ7L1V2 547 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 KCNE4Q8WWG9 221 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 VCPIP1Q96JH7 1222 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 EXOC2Q96KP1 924 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 AGPAT1Q99943 283 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 LRRC61Q9BV99 259 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 C1QTNF7Q9BXJ2 289 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 CATSPERBQ9H7T0 1116 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 CPNE5Q9HCH3 593 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms