RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 RAI2Q9Y5P3 530 aa23.17■■□□□ 1.3
IRF3-227ENST00000600911 E7EVH7 732 aa23.16■■□□□ 1.3
IRF3-227ENST00000600911 MAN2B1O00754 1011 aa23.16■■□□□ 1.3
IRF3-227ENST00000600911 SUN1O94901 812 aa23.16■■□□□ 1.3
IRF3-227ENST00000600911 SERPINF2P08697 491 aa23.16■■□□□ 1.3
IRF3-227ENST00000600911 AP1S1P61966 158 aa23.16■■□□□ 1.3
IRF3-227ENST00000600911 MPP3Q13368 585 aa23.16■■□□□ 1.3
IRF3-227ENST00000600911 GALNT3Q14435 633 aa23.16■■□□□ 1.3
IRF3-227ENST00000600911 MORF4L2Q15014 288 aa23.16■■□□□ 1.3
IRF3-227ENST00000600911 POM121L1PQ3SYA9 428 aa23.16■■□□□ 1.3
IRF3-227ENST00000600911 TJAP1Q5JTD0 557 aa23.16■■□□□ 1.3
IRF3-227ENST00000600911 NUDT18Q6ZVK8 323 aa23.16■■□□□ 1.3
IRF3-227ENST00000600911 IFT20Q8IY31 132 aa23.16■■□□□ 1.3
IRF3-227ENST00000600911 UBALD2Q8IYN6 164 aa23.16■■□□□ 1.3
IRF3-227ENST00000600911 GABRG3Q99928 467 aa23.16■■□□□ 1.3
IRF3-227ENST00000600911 WDR83Q9BRX9 315 aaKnown RBP23.16■■□□□ 1.3
IRF3-227ENST00000600911 EIF2B3Q9NR50 452 aaKnown RBP23.16■■□□□ 1.3
IRF3-227ENST00000600911 EDDM13A0A1B0GTR0 161 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 FZD6O60353 706 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 LEFTY1O75610 366 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 ANXA9O76027 345 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 PRKCGP05129 697 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 ZXDAP98168 799 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 PRPSAP1Q14558 356 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 ARSIQ5FYB1 569 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 UBAP2Q5T6F2 1119 aaKnown RBP23.15■■□□□ 1.3
IRF3-227ENST00000600911 RANBP10Q6VN20 620 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 CCNI2Q6ZMN8 369 aaPredicted RBP23.15■■□□□ 1.3
IRF3-227ENST00000600911 PLPP6Q8IY26 295 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 SLC25A41Q8N5S1 370 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 SERPINB12Q96P63 405 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 TBL1YQ9BQ87 522 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 SLC6A17Q9H1V8 727 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 RAB21Q9UL25 225 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 SHOC2Q9UQ13 582 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 AAR2Q9Y312 384 aaKnown RBP23.15■■□□□ 1.3
IRF3-227ENST00000600911 A0A0U1RQS6 177 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 LOC285095A0A1B0GVY8 99 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 A0A1W2PQF6 199 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 KANSL1LA0AUZ9 987 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 PDGFBP01127 241 aaPredicted RBP23.15■■□□□ 1.3
IRF3-227ENST00000600911 UGT2B4P06133 528 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 NTSR1P30989 418 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 LMAN1P49257 510 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 TUBB4BP68371 445 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 CALCOCO2Q13137 446 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 HLTFQ14527 1009 aaKnown RBP eCLIP23.15■■□□□ 1.3
IRF3-227ENST00000600911 UBXN2BQ14CS0 331 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 WDR93Q6P2C0 686 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 HOOK3Q86VS8 718 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 MPP5Q8N3R9 675 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 HEPHQ9BQS7 1158 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 TBC1D17Q9HA65 648 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 LMAN1LQ9HAT1 526 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 VPS45Q9NRW7 570 aa23.15■■□□□ 1.3
IRF3-227ENST00000600911 TECTAO75443 2155 aa23.14■■□□□ 1.3
IRF3-227ENST00000600911 HTRA2O43464 458 aaPredicted RBP23.14■■□□□ 1.29
IRF3-227ENST00000600911 TPH1P17752 444 aa23.14■■□□□ 1.29
IRF3-227ENST00000600911 TNFRSF8P28908 595 aa23.14■■□□□ 1.29
IRF3-227ENST00000600911 MSLNQ13421 630 aaPredicted RBP23.14■■□□□ 1.29
IRF3-227ENST00000600911 TMEM92Q6UXU6 159 aa23.14■■□□□ 1.29
IRF3-227ENST00000600911 PCGF5Q86SE9 256 aa23.14■■□□□ 1.29
IRF3-227ENST00000600911 CACUL1Q86Y37 369 aa23.14■■□□□ 1.29
IRF3-227ENST00000600911 PDCD6IPQ8WUM4 868 aaKnown RBP23.14■■□□□ 1.29
IRF3-227ENST00000600911 LRRC40Q9H9A6 602 aa23.14■■□□□ 1.29
IRF3-227ENST00000600911 CASS4Q9NQ75 786 aa23.14■■□□□ 1.29
IRF3-227ENST00000600911 IL36AQ9UHA7 158 aa23.14■■□□□ 1.29
IRF3-227ENST00000600911 PLK4O00444 970 aa23.13■■□□□ 1.29
IRF3-227ENST00000600911 POP4O95707 220 aaKnown RBP23.13■■□□□ 1.29
IRF3-227ENST00000600911 MAGEA3P43357 314 aa23.13■■□□□ 1.29
IRF3-227ENST00000600911 COPAP53621 1224 aa23.13■■□□□ 1.29
IRF3-227ENST00000600911 MRPS21P82921 87 aaKnown RBP23.13■■□□□ 1.29
IRF3-227ENST00000600911 CDK18Q07002 472 aa23.13■■□□□ 1.29
IRF3-227ENST00000600911 CAMK2GQ13555 558 aaPredicted RBP23.13■■□□□ 1.29
IRF3-227ENST00000600911 CUL1Q13616 776 aa23.13■■□□□ 1.29
IRF3-227ENST00000600911 FASTKD3Q14CZ7 662 aaKnown RBP23.13■■□□□ 1.29
IRF3-227ENST00000600911 SIRPB2Q5JXA9 342 aa23.13■■□□□ 1.29
IRF3-227ENST00000600911 HP1BP3Q5SSJ5 553 aaPredicted RBP23.13■■□□□ 1.29
IRF3-227ENST00000600911 MICALCLQ6ZW33 695 aa23.13■■□□□ 1.29
IRF3-227ENST00000600911 MCUQ8NE86 351 aa23.13■■□□□ 1.29
IRF3-227ENST00000600911 KLHL32Q96NJ5 620 aa23.13■■□□□ 1.29
IRF3-227ENST00000600911 TRIM56Q9BRZ2 755 aaKnown RBP23.13■■□□□ 1.29
IRF3-227ENST00000600911 CPEB1Q9BZB8 566 aaKnown RBP23.13■■□□□ 1.29
IRF3-227ENST00000600911 SLC8A2Q9UPR5 921 aa23.13■■□□□ 1.29
IRF3-227ENST00000600911 A0A0C4DFX4 3053 aa23.13■■□□□ 1.29
IRF3-227ENST00000600911 UQCRHLA0A096LP55 91 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 FAM170BA6NMN3 283 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 UQCRHP07919 91 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 PIRTP0C851 137 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 SLC8A1P32418 973 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 RECQLP46063 649 aaPredicted RBP23.12■■□□□ 1.29
IRF3-227ENST00000600911 CRADDP78560 199 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 BCL2L1Q07817 233 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 SLC1A5Q15758 541 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 SLC14A2Q15849 920 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 RALGPS1Q5JS13 557 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 LRRC73Q5JTD7 316 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 PIH1D2Q8WWB5 315 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 ARRDC3Q96B67 414 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 ECHDC3Q96DC8 303 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms