RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, human

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRAMD1A-209	ENST00000598580	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	GDPD4	Q6W3E5	623 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TTC7B	Q86TV6	843 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ZSWIM9	Q86XI8	627 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	FAM114A1	Q8IWE2	563 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PHACTR4	Q8IZ21	702 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	LSM14A	Q8ND56	463 aa	Known RBP	11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ZNF248	Q8NDW4	579 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	FAM174A	Q8TBP5	190 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	FAM172A	Q8WUF8	416 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TTC9	Q92623	222 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	LGMN	Q99538	433 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	WRAP53	Q9BUR4	548 aa	Known RBP	11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	DUSP23	Q9BVJ7	150 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ABCG4	Q9H172	646 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	VPS16	Q9H269	839 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	USP29	Q9HBJ7	922 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	NLRC4	Q9NPP4	1024 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	LHX3	Q9UBR4	397 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	IPO11	Q9UI26	975 aa	Known RBP	11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SIK3	Q9Y2K2	1263 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	COQ6	Q9Y2Z9	468 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TLN1	Q9Y490	2541 aa	Known RBP	11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	MYO18B	Q8IUG5	2567 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TEX51	A0A1B0GUA7	166 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	LMO7DN	F2Z398	122 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PES1	O00541	588 aa	Known RBP	11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	KLK10	O43240	276 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	BUB1	O43683	1085 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	RAMP2	O60895	175 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PRKCG	P05129	697 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SDC4	P31431	198 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	EIF4A3	P38919	411 aa	Known RBP	11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	RGR	P47804	291 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	DUSP3	P51452	185 aa	Predicted RBP	11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ERVPABLB-1	P60509	514 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	OGDH	Q02218	1023 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	POLD3	Q15054	466 aa	Predicted RBP	11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TCEA2	Q15560	299 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	KLHL40	Q2TBA0	621 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PRRT3	Q5FWE3	981 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	C3orf38	Q5JPI3	329 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	IGF2-AS	Q6U949	168 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	STRADA	Q7RTN6	431 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	B3GNT8	Q7Z7M8	397 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TSACC	Q96A04	125 aa	Predicted RBP	11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	NTAN1	Q96AB6	310 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	RAB7B	Q96AH8	199 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TBC1D31	Q96DN5	1066 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	HMCES	Q96FZ2	354 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	EPAS1	Q99814	870 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TTYH3	Q9C0H2	523 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TMEM51	Q9NW97	253 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	MFHAS1	Q9Y4C4	1052 aa		11.16	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	CYSRT1	A8MQ03	144 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	CDRT15L2	A8MXV6	281 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	RASA4B	C9J798	803 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580		J3KR12	359 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	NTN3	O00634	580 aa	Predicted RBP	11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	NEMP1	O14524	444 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	CCP110	O43303	1012 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	RASA4	O43374	803 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PIGN	O95427	931 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	KRT3	P12035	628 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	EEF1G	P26641	437 aa	Known RBP	11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SNRPD1	P62314	119 aa	Known RBP	11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	RPL7A	P62424	266 aa	Known RBP	11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	CFHR1	Q03591	330 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SRSF6	Q13247	344 aa	Known RBP	11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SERINC3	Q13530	473 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	LY6D	Q14210	128 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	IRF4	Q15306	451 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	NR0B2	Q15466	257 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	CLEC16A	Q2KHT3	1053 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ALG11	Q2TAA5	492 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TMEM52B	Q4KMG9	183 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	HS1BP3	Q53T59	392 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PPP1R15B	Q5SWA1	713 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	C6orf132	Q5T0Z8	1188 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ZNF677	Q86XU0	584 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PHF13	Q86YI8	300 aa	Predicted RBP	11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ARFGAP1	Q8N6T3	406 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	RTL3	Q8N8U3	475 aa	Known RBP	11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PLA2G15	Q8NCC3	412 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	DENND6B	Q8NEG7	585 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ENOX1	Q8TC92	643 aa	Known RBP	11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SNRNP27	Q8WVK2	155 aa	Known RBP	11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	KCNE4	Q8WWG9	221 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	EXOC2	Q96KP1	924 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	IL12RB2	Q99665	862 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	RETREG1	Q9H6L5	497 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	FANCL	Q9NW38	375 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SPAST	Q9UBP0	616 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	DKK3	Q9UBP4	350 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	APOBEC3B	Q9UH17	382 aa	Known RBP	11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PADI4	Q9UM07	663 aa		11.15	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SPTA1	P02549	2419 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580		A0A1W2PQM1	296 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	TSPAN11	A1L157	253 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms