RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 EIF4A3P38919 411 aaKnown RBP10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 RHOAP61586 193 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 PPARDQ03181 441 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 VAC14Q08AM6 782 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 SPIDRQ14159 915 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 KLHL40Q2TBA0 621 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 DPCR1Q3MIW9 517 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 C6orf132Q5T0Z8 1188 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 FAM72AQ5TYM5 149 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 MANEALQ5VSG8 457 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 FAM72DQ6L9T8 149 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 STRADAQ7RTN6 431 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 NLRP14Q86W24 1093 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 FAM72BQ86X60 149 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 SLC35F3Q8IY50 421 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 ARL14Q8N4G2 192 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 NETO2Q8NC67 525 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 WDR36Q8NI36 951 aaKnown RBP10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 JOSD2Q8TAC2 188 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 SLC30A5Q8TAD4 765 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 WDR48Q8TAF3 677 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 GPT2Q8TD30 523 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 EPS8L1Q8TE68 723 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 SLC20A1Q8WUM9 679 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 NAT6Q93015 286 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 CCDC97Q96F63 343 aaPredicted RBP10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 WBP1Q96G27 269 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 GDAP1L1Q96MZ0 367 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 WRAP53Q9BUR4 548 aaKnown RBP10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 SELENOOQ9BVL4 669 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 BOCQ9BWV1 1114 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 SAMSN1Q9NSI8 373 aaKnown RBP10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 GULP1Q9UBP9 304 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 PADI4Q9UM07 663 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 A0A1W2PNU3 283 aaPredicted RBP10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 ZSCAN5CA6NGD5 496 aaPredicted RBP10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 C2CD4BA6NLJ0 364 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 LMO7DNF2Z398 122 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 AREL1O15033 823 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 YY2O15391 372 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 LZTS3O60299 673 aaPredicted RBP10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 TMCC1O94876 653 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 CYP1A1P04798 512 aaPredicted RBP10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 KRT3P12035 628 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 TSHRP16473 764 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 MMP8P22894 467 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 ERCC5P28715 1186 aaPredicted RBP10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 BLKP51451 505 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 FMO1Q01740 532 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 CDR2Q01850 454 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 LY6DQ14210 128 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 ZSCAN23Q3MJ62 389 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 IGF2-ASQ6U949 168 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 ENPP7Q6UWV6 458 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 MACC1Q6ZN28 852 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 RD3Q7Z3Z2 195 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 HID1Q8IV36 788 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 CCDC185Q8N715 623 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 FAM172AQ8WUF8 416 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 SCG3Q8WXD2 468 aaKnown RBP10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 PRR11Q96HE9 360 aaPredicted RBP10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 EPAS1Q99814 870 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 NCAPGQ9BPX3 1015 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 CCDC3Q9BQI4 270 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 LRRC61Q9BV99 259 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 TTYH3Q9C0H2 523 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 CLPBQ9H078 707 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 VPS16Q9H269 839 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 CLSTN2Q9H4D0 955 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 NLRC4Q9NPP4 1024 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 MBNL1Q9NR56 388 aaKnown RBP10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 TAB2Q9NYJ8 693 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 SIRPGQ9P1W8 387 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 PNMA8BQ9ULN7 279 aaPredicted RBP10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 COQ6Q9Y2Z9 468 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 PCDHGA8Q9Y5G5 932 aa10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 GCN1Q92616 2671 aaKnown RBP10.69□□□□□ -0.7
CHMP2A-202ENST00000596708 AHCTF1Q8WYP5 2266 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 CCDC187A0A096LP49 1063 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 J3QKU1 62 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 TOR1BO14657 336 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 CASC3O15234 703 aaKnown RBP10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 CREB3O43889 395 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 TNFSF15O95150 251 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 TPM2P07951 284 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 TIMP2P16035 220 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 GPD1P21695 349 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 EEF1GP26641 437 aaKnown RBP10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 HTR1BP28222 390 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 EPHB2P29323 1055 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 PTPN9P43378 593 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 HDAC4P56524 1084 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 POLR2FP61218 127 aaKnown RBP10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 ELP6Q0PNE2 266 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 IRF4Q15306 451 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 ELOCQ15369 112 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 TCEA2Q15560 299 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 TCP11X2Q5H9J9 407 aa10.68□□□□□ -0.7
CHMP2A-202ENST00000596708 EFHC2Q5JST6 749 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms