RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 GEMIN4P57678 1058 aaKnown RBP10.1□□□□□ -0.79
LIG1-209ENST00000596104 BPIFB4P59827 614 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 SNRPD1P62314 119 aaKnown RBP10.1□□□□□ -0.79
LIG1-209ENST00000596104 PPARDQ03181 441 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 SRSF6Q13247 344 aaKnown RBP10.1□□□□□ -0.79
LIG1-209ENST00000596104 EIF3IQ13347 325 aaKnown RBP10.1□□□□□ -0.79
LIG1-209ENST00000596104 POLD3Q15054 466 aaPredicted RBP10.1□□□□□ -0.79
LIG1-209ENST00000596104 ALG11Q2TAA5 492 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 LINC00303Q3SY05 128 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 LRRC73Q5JTD7 316 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 ATXN7L2Q5T6C5 722 aaPredicted RBP10.1□□□□□ -0.79
LIG1-209ENST00000596104 FAXCQ5TGI0 409 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 ESRP1Q6NXG1 681 aaKnown RBP10.1□□□□□ -0.79
LIG1-209ENST00000596104 GDPD4Q6W3E5 623 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 LEKR1Q6ZMV7 388 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 CREBRFQ8IUR6 639 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 RYBPQ8N488 228 aaPredicted RBP10.1□□□□□ -0.79
LIG1-209ENST00000596104 ARL10Q8N8L6 244 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 KYQ8NBH2 561 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 PCDH19Q8TAB3 1148 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 EPAS1Q99814 870 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 OSBPL1AQ9BXW6 950 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 MAGEH1Q9H213 219 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 RETREG1Q9H6L5 497 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 TMEM248Q9NWD8 314 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 TRPM6Q9BX84 2022 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 A0A1W2PQM1 296 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 D6RAR5 112 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 FAM72CH0Y354 149 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 ARHGAP6O43182 974 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 RAMP2O60895 175 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 GADD45BO75293 160 aaPredicted RBP10.09□□□□□ -0.79
LIG1-209ENST00000596104 LRIG2O94898 1065 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 LSM8O95777 96 aaKnown RBP10.09□□□□□ -0.79
LIG1-209ENST00000596104 TIMP2P16035 220 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 CCKBRP32239 447 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 MTIF2P46199 727 aaKnown RBP10.09□□□□□ -0.79
LIG1-209ENST00000596104 PEX5P50542 639 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 HK3P52790 923 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 NOMO3P69849 1222 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 CCL7P80098 99 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 ATP11AP98196 1134 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 NFATC3Q12968 1075 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 IRF4Q15306 451 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 TGIF1Q15583 401 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 KLHL40Q2TBA0 621 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 WSCD2Q2TBF2 565 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 FAM72AQ5TYM5 149 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 TAF3Q5VWG9 929 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 FAM72DQ6L9T8 149 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 LVRNQ6Q4G3 990 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 NYAP1Q6ZVC0 841 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 RAB11FIP2Q7L804 512 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 TTC7BQ86TV6 843 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 NOP9Q86U38 636 aaKnown RBP10.09□□□□□ -0.79
LIG1-209ENST00000596104 FAM72BQ86X60 149 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 SDR16C5Q8N3Y7 309 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 FSTL5Q8N475 847 aaPredicted RBP10.09□□□□□ -0.79
LIG1-209ENST00000596104 FBXO39Q8N4B4 442 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 EMC1Q8N766 993 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 CCDC74AQ96AQ1 378 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 C1QTNF7Q9BXJ2 289 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 MAGEB5Q9BZ81 275 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 EDEM3Q9BZQ6 932 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 FOXP3Q9BZS1 431 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 PDCL3Q9H2J4 239 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 SYNDIG1Q9H7V2 258 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 EPB41L5Q9HCM4 733 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.09□□□□□ -0.79
LIG1-209ENST00000596104 SIRPGQ9P1W8 387 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 DKK3Q9UBP4 350 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 GULP1Q9UBP9 304 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 OR12D3Q9UGF7 316 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 DNAI1Q9UI46 699 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 MFHAS1Q9Y4C4 1052 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 FHOD1Q9Y613 1164 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 TDRD6O60522 2096 aaKnown RBP10.09□□□□□ -0.79
LIG1-209ENST00000596104 AHCTF1Q8WYP5 2266 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 NAV2Q8IVL1 2488 aa10.09□□□□□ -0.79
LIG1-209ENST00000596104 KDELR3O43731 214 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 TMCC1O94876 653 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 RASGRP1O95267 797 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 MMEP08473 750 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 ALPIP09923 528 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 HGFP14210 728 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 ITGB6P18564 788 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 CSRP3P50461 194 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 BLKP51451 505 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 INHBCP55103 352 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 RAPGEF1Q13905 1077 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 ELOCQ15369 112 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 MAN2A1Q16706 1144 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 C15orf59Q2T9L4 293 aaPredicted RBP10.08□□□□□ -0.8
LIG1-209ENST00000596104 CCDC14Q49A88 953 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 TMEM52BQ4KMG9 183 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 MIIPQ5JXC2 388 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 NAA35Q5VZE5 725 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 KCTD16Q68DU8 428 aa10.08□□□□□ -0.8
LIG1-209ENST00000596104 RWDD4Q6NW29 188 aaKnown RBP10.08□□□□□ -0.8
LIG1-209ENST00000596104 XKR5Q6UX68 686 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms