RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ARTNQ5T4W7 220 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 KLHL35Q6PF15 583 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 DEFB128Q7Z7B8 93 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 ICA1LQ8NDH6 482 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 ZFP28Q8NHY6 868 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 FBXO27Q8NI29 283 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 SNRNP27Q8WVK2 155 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 MFSD3Q96ES6 412 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 ATXN7L3BQ96GX2 97 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 CLPTM1LQ96KA5 538 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 CHRAC1Q9NRG0 131 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 TXNDC16Q9P2K2 825 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 MTMR11A4FU01 709 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 ERI2A8K979 691 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 MAGEA11P43364 429 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 FOLH1Q04609 750 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 TAF10Q12962 218 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 PRSS55Q6UWB4 352 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 Q6ZNX1 250 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 NPAS4Q8IUM7 802 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 A0A088AWK7 358 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 CCDC160A6NGH7 325 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 PITPNM1O00562 1244 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 TPP1O14773 563 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 CCNT2O60583 730 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 TRMUO75648 421 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 GALTP07902 379 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 SPANXN3Q5MJ09 141 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 C10orf120Q5SQS8 335 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 TRIM67Q6ZTA4 783 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 ALYREFQ86V81 257 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 LZTR1Q8N653 840 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 GIPC2Q8TF65 315 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 BCL7CQ8WUZ0 217 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 WWP1Q9H0M0 922 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 ZNF696Q9H7X3 374 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 ZNHIT2Q9UHR6 403 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 ADAMTS6Q9UKP5 1117 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 SORCS3Q9UPU3 1222 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 CCDC195A0A1B0GUA6 201 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 KANSL1LA0AUZ9 987 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 VNN2O95498 520 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 ALDOAP04075 364 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 NUMBP49757 651 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 PDE1BQ01064 536 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 USP41Q3LFD5 358 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 LPCAT4Q643R3 524 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 RNF111Q6ZNA4 994 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 KDELC2Q7Z4H8 507 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 AHI1Q8N157 1196 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 RTL3Q8N8U3 475 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 IPMKQ8NFU5 416 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 CEP70Q8NHQ1 597 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 APBB2Q92870 758 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 SLC39A13Q96H72 371 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 TSGA13Q96PP4 275 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 AGAP2Q99490 1192 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 SOX13Q9UN79 622 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 LZTS1Q9Y250 596 aa17.25■□□□□ 0.35
SHKBP1-205ENST00000594973 E2F8A0AVK6 867 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 GOLGA8TH3BQL2 631 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 MATN3O15232 486 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 CNTFP26441 200 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 GSTM4Q03013 218 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 GPR17Q13304 367 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 MS4A13Q5J8X5 152 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 FBXL19Q6PCT2 694 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 TMEM135Q86UB9 458 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 METTL25Q8N6Q8 603 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 C7orf26Q96N11 449 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 CORO1BQ9BR76 489 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 CCDC106Q9BWC9 280 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 HIPK3Q9H422 1215 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 RBM22Q9NW64 420 aaKnown RBP eCLIP17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 PPARGC1AQ9UBK2 798 aaKnown RBP17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 PADI4Q9UM07 663 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 CDY1Q9Y6F8 540 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 ZCWPW2A0A1B0GU75 182 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 FAM237BA0A1B0GVD1 139 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 CBFA2T3O75081 653 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 PDE5AO76074 875 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 SLC2A3P11169 496 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 PEX2P28328 305 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 HTR7P34969 479 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 ABCG1P45844 678 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 ZNF33AQ06730 810 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 CDH17Q12864 832 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 MYLK3Q32MK0 819 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 NAPEPLDQ6IQ20 393 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 MSANTD2Q6P1R3 559 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 TMC7Q7Z402 723 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 ZNF778Q96MU6 729 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 TTPALQ9BTX7 342 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 MARCH2Q9P0N8 246 aa17.24■□□□□ 0.35
SHKBP1-205ENST00000594973 SH3PXD2BA1X283 911 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 TXNDC9O14530 226 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 CNTN5O94779 1100 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms