RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 RAD9BQ6WBX8 426 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 ZSCAN30Q86W11 494 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 CAMK1DQ8IU85 385 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 CCDC50Q8IVM0 306 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 FAM71BQ8TC56 605 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 CXorf40AQ8TE69 158 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 PDCD6IPQ8WUM4 868 aaKnown RBP10.19□□□□□ -0.78
BRCA1-227ENST00000591849 KLHDC7BQ96G42 594 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 ZNF641Q96N77 438 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-227ENST00000591849 RNF157Q96PX1 679 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 SLC17A9Q9BYT1 436 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 GDF3Q9NR23 364 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 TFR2Q9UP52 801 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 TTLL3Q9Y4R7 772 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 HEY1Q9Y5J3 304 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 SNX11Q9Y5W9 270 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 MUC22E2RYF6 1773 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-227ENST00000591849 USP24Q9UPU5 2620 aa10.19□□□□□ -0.78
BRCA1-227ENST00000591849 IGLON5A6NGN9 336 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 TLR4O00206 839 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 RNF103O00237 685 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 KCNK3O14649 394 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 VILLO15195 856 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 LATO43561 262 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 PSTPIP1O43586 416 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 NRDCO43847 1150 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 MFSD11O43934 449 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 DFNA5O60443 496 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 ZRANB2O95218 330 aaKnown RBP eCLIP10.18□□□□□ -0.78
BRCA1-227ENST00000591849 MAP3K6O95382 1288 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 PAK4O96013 591 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-227ENST00000591849 TIMP2P16035 220 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 HNRNPA2B1P22626 353 aaKnown RBP10.18□□□□□ -0.78
BRCA1-227ENST00000591849 NFKBIAP25963 317 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 CETN2P41208 172 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 GARSP41250 739 aaKnown RBP10.18□□□□□ -0.78
BRCA1-227ENST00000591849 ABL2P42684 1182 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 NOVA1P51513 510 aaKnown RBP10.18□□□□□ -0.78
BRCA1-227ENST00000591849 SUOXP51687 545 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 HADHBP55084 474 aaKnown RBP10.18□□□□□ -0.78
BRCA1-227ENST00000591849 DYNLT1P63172 113 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 FAM193AP78312 1265 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 KIF5AQ12840 1032 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 TFDP2Q14188 446 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 LRRC73Q5JTD7 316 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 CCDC181Q5TID7 509 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 KAZNQ674X7 775 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 SEL1L3Q68CR1 1132 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 NCBP2-AS2Q69YL0 99 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 BRAT1Q6PJG6 821 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 BZW1Q7L1Q6 419 aaKnown RBP10.18□□□□□ -0.78
BRCA1-227ENST00000591849 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.18□□□□□ -0.78
BRCA1-227ENST00000591849 MFSD2AQ8NA29 543 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 ACRBPQ8NEB7 543 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 DEFB124Q8NES8 71 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 C1orf216Q8TAB5 229 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 HCAR2Q8TDS4 363 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 SETD7Q8WTS6 366 aaKnown RBP10.18□□□□□ -0.78
BRCA1-227ENST00000591849 FAM131CQ96AQ9 280 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 PSKH2Q96QS6 385 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 C1QTNF7Q9BXJ2 289 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 EBF2Q9HAK2 575 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 NT5MQ9NPB1 228 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 TM7SF3Q9NS93 570 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 DNAAF2Q9NVR5 837 aaKnown RBP10.18□□□□□ -0.78
BRCA1-227ENST00000591849 DKK3Q9UBP4 350 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 SLCO1B1Q9Y6L6 691 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 LAMA1P25391 3075 aa10.18□□□□□ -0.78
BRCA1-227ENST00000591849 A0A1W2PQ67 120 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 UPK3BL1B0FP48 263 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 UPK3BL2E5RIL1 263 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 FPGTO14772 594 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 MATN3O15232 486 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 LZTS3O60299 673 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-227ENST00000591849 MMP20O60882 483 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 TM7SF2O76062 418 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 KCNK5O95279 499 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 PTMAP06454 111 aaKnown RBP10.17□□□□□ -0.78
BRCA1-227ENST00000591849 THEGLP0DJG4 465 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 KRT10P13645 584 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 FECHP22830 423 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 CCNCP24863 283 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 RGRP47804 291 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 ARRB1P49407 418 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-227ENST00000591849 CCT8P50990 548 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 VAV2P52735 878 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 MAXP61244 160 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 GBE1Q04446 702 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 GALNT2Q10471 571 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 OVGP1Q12889 678 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 SLC14A1Q13336 389 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 HNRNPDQ14103 355 aaKnown RBP10.17□□□□□ -0.78
BRCA1-227ENST00000591849 PDK1Q15118 436 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 ZNF284Q2VY69 593 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 PSAPL1Q6NUJ1 521 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 C11orf63Q6NUN7 778 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 CCDC13Q8IYE1 715 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 RCOR2Q8IZ40 523 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 NDUFAF2Q8N183 169 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 PQLC3Q8N755 202 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms