RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 LHX3Q9UBR4 397 aa19.02■□□□□ 0.64
TRIM47-205ENST00000587774 AK5Q9Y6K8 562 aa19.02■□□□□ 0.64
TRIM47-205ENST00000587774 U3KQA8 63 aa19.02■□□□□ 0.64
TRIM47-205ENST00000587774 GCN1Q92616 2671 aaKnown RBP19.01■□□□□ 0.63
TRIM47-205ENST00000587774 NEMP2A6NFY4 417 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 TMCO5BA8MYB1 307 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 H3BM21 787 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 K7ESM1 405 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 TLX3O43711 291 aaPredicted RBP19.01■□□□□ 0.63
TRIM47-205ENST00000587774 TPI1P60174 286 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 PFN3P60673 137 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 E2F1Q01094 437 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 RAD51Q06609 339 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 TTC7BQ86TV6 843 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 CACTIN-AS1Q8N1I8 211 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 CENPTQ96BT3 561 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 LRRC19Q9H756 370 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 PDFQ9HBH1 243 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 GPATCH2LQ9NWQ4 482 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 MYO6Q9UM54 1294 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 AP4E1Q9UPM8 1137 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 MFHAS1Q9Y4C4 1052 aa19.01■□□□□ 0.63
TRIM47-205ENST00000587774 LRRC53A6NM62 1247 aa19■□□□□ 0.63
TRIM47-205ENST00000587774 INSIG1O15503 277 aa19■□□□□ 0.63
TRIM47-205ENST00000587774 PIGNO95427 931 aa19■□□□□ 0.63
TRIM47-205ENST00000587774 JUNDP17535 347 aa19■□□□□ 0.63
TRIM47-205ENST00000587774 DESP17661 470 aa19■□□□□ 0.63
TRIM47-205ENST00000587774 ITIH2P19823 946 aa19■□□□□ 0.63
TRIM47-205ENST00000587774 TNFAIP3P21580 790 aa19■□□□□ 0.63
TRIM47-205ENST00000587774 EIF2B5Q13144 721 aaKnown RBP19■□□□□ 0.63
TRIM47-205ENST00000587774 MAMLD1Q13495 774 aa19■□□□□ 0.63
TRIM47-205ENST00000587774 VPS36Q86VN1 386 aa19■□□□□ 0.63
TRIM47-205ENST00000587774 DNAAF5Q86Y56 855 aa19■□□□□ 0.63
TRIM47-205ENST00000587774 FAM181AQ8N9Y4 354 aa19■□□□□ 0.63
TRIM47-205ENST00000587774 VCPIP1Q96JH7 1222 aa19■□□□□ 0.63
TRIM47-205ENST00000587774 PEBP4Q96S96 227 aa19■□□□□ 0.63
TRIM47-205ENST00000587774 WRAP53Q9BUR4 548 aaKnown RBP19■□□□□ 0.63
TRIM47-205ENST00000587774 DUSP23Q9BVJ7 150 aa19■□□□□ 0.63
TRIM47-205ENST00000587774 NAT10Q9H0A0 1025 aaKnown RBP19■□□□□ 0.63
TRIM47-205ENST00000587774 RTN4Q9NQC3 1192 aaKnown RBP19■□□□□ 0.63
TRIM47-205ENST00000587774 UBA2Q9UBT2 640 aaPredicted RBP19■□□□□ 0.63
TRIM47-205ENST00000587774 IPO11Q9UI26 975 aaKnown RBP19■□□□□ 0.63
TRIM47-205ENST00000587774 AQP9O43315 295 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 BRINP1O60477 761 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 MMP20O60882 483 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 TM7SF2O76062 418 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 MT-CO3P00414 261 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 PSMA2P25787 234 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 HTR7P34969 479 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 THOP1P52888 689 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 CYTH1Q15438 398 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 CA9Q16790 459 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 E4F1Q66K89 784 aaPredicted RBP18.99■□□□□ 0.63
TRIM47-205ENST00000587774 PLEKHA7Q6IQ23 1121 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 ZCCHC8Q6NZY4 707 aaKnown RBP18.99■□□□□ 0.63
TRIM47-205ENST00000587774 RBFAQ8N0V3 343 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 CXorf40AQ8TE69 158 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 CELF6Q96J87 481 aaKnown RBP18.99■□□□□ 0.63
TRIM47-205ENST00000587774 NCAPGQ9BPX3 1015 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 BPIFA3Q9BQP9 254 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 CPEB1Q9BZB8 566 aaKnown RBP18.99■□□□□ 0.63
TRIM47-205ENST00000587774 DHX35Q9H5Z1 703 aaKnown RBP18.99■□□□□ 0.63
TRIM47-205ENST00000587774 PARVAQ9NVD7 372 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 DKK3Q9UBP4 350 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 PNMA8BQ9ULN7 279 aaPredicted RBP18.99■□□□□ 0.63
TRIM47-205ENST00000587774 PCDHB1Q9Y5F3 818 aa18.99■□□□□ 0.63
TRIM47-205ENST00000587774 J3KR12 359 aa18.98■□□□□ 0.63
TRIM47-205ENST00000587774 OPA1O60313 960 aa18.98■□□□□ 0.63
TRIM47-205ENST00000587774 GP1BAP07359 652 aa18.98■□□□□ 0.63
TRIM47-205ENST00000587774 TIMP2P16035 220 aa18.98■□□□□ 0.63
TRIM47-205ENST00000587774 EIF2S3P41091 472 aaKnown RBP18.98■□□□□ 0.63
TRIM47-205ENST00000587774 ABCG1P45844 678 aa18.98■□□□□ 0.63
TRIM47-205ENST00000587774 COL9A2Q14055 689 aaPredicted RBP18.98■□□□□ 0.63
TRIM47-205ENST00000587774 ASIC2Q16515 512 aa18.98■□□□□ 0.63
TRIM47-205ENST00000587774 KLHL40Q2TBA0 621 aa18.98■□□□□ 0.63
TRIM47-205ENST00000587774 DEFB133Q30KQ1 61 aa18.98■□□□□ 0.63
TRIM47-205ENST00000587774 CDCP2Q5VXM1 449 aa18.98■□□□□ 0.63
TRIM47-205ENST00000587774 PPP1R2P3Q6NXS1 205 aa18.98■□□□□ 0.63
TRIM47-205ENST00000587774 ARFGAP1Q8N6T3 406 aa18.98■□□□□ 0.63
TRIM47-205ENST00000587774 TP53I13Q8NBR0 393 aaPredicted RBP18.98■□□□□ 0.63
TRIM47-205ENST00000587774 IFI44Q8TCB0 444 aa18.98■□□□□ 0.63
TRIM47-205ENST00000587774 LMX1AQ8TE12 382 aa18.98■□□□□ 0.63
TRIM47-205ENST00000587774 SNRNP25Q9BV90 132 aaKnown RBP18.98■□□□□ 0.63
TRIM47-205ENST00000587774 TRIM7Q9C029 511 aa18.98■□□□□ 0.63
TRIM47-205ENST00000587774 TCEAL2Q9H3H9 227 aaPredicted RBP18.98■□□□□ 0.63
TRIM47-205ENST00000587774 USP29Q9HBJ7 922 aa18.98■□□□□ 0.63
TRIM47-205ENST00000587774 MBNL1Q9NR56 388 aaKnown RBP18.98■□□□□ 0.63
TRIM47-205ENST00000587774 APOBEC3BQ9UH17 382 aaKnown RBP18.98■□□□□ 0.63
TRIM47-205ENST00000587774 CSNK1G3Q9Y6M4 447 aa18.98■□□□□ 0.63
TRIM47-205ENST00000587774 TSPAN11A1L157 253 aa18.97■□□□□ 0.63
TRIM47-205ENST00000587774 EEF2KO00418 725 aaKnown RBP18.97■□□□□ 0.63
TRIM47-205ENST00000587774 PRAMEF11O60813 436 aa18.97■□□□□ 0.63
TRIM47-205ENST00000587774 ITPKBP27987 946 aa18.97■□□□□ 0.63
TRIM47-205ENST00000587774 NDST2P52849 883 aa18.97■□□□□ 0.63
TRIM47-205ENST00000587774 IRF4Q15306 451 aa18.97■□□□□ 0.63
TRIM47-205ENST00000587774 MACC1Q6ZN28 852 aa18.97■□□□□ 0.63
TRIM47-205ENST00000587774 CYP4V2Q6ZWL3 525 aaPredicted RBP18.97■□□□□ 0.63
TRIM47-205ENST00000587774 PHACTR4Q8IZ21 702 aa18.97■□□□□ 0.63
TRIM47-205ENST00000587774 LRRC61Q9BV99 259 aa18.97■□□□□ 0.63
TRIM47-205ENST00000587774 C1QTNF7Q9BXJ2 289 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms