RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 LRFN5Q96NI6 719 aa4.57□□□□□ -1.68
CACNA1A-208ENST00000587451 SLITRK1Q96PX8 696 aa4.57□□□□□ -1.68
CACNA1A-208ENST00000587451 YME1L1Q96TA2 773 aa4.57□□□□□ -1.68
CACNA1A-208ENST00000587451 CD180Q99467 661 aa4.57□□□□□ -1.68
CACNA1A-208ENST00000587451 IL25Q9H293 177 aa4.57□□□□□ -1.68
CACNA1A-208ENST00000587451 TLR8Q9NR97 1041 aaKnown RBP4.57□□□□□ -1.68
CACNA1A-208ENST00000587451 ALKBH4Q9NXW9 302 aa4.57□□□□□ -1.68
CACNA1A-208ENST00000587451 OR6C3Q9NZP0 311 aa4.57□□□□□ -1.68
CACNA1A-208ENST00000587451 RIPOR2Q9Y4F9 1068 aa4.57□□□□□ -1.68
CACNA1A-208ENST00000587451 SAA2-SAA4A0A096LPE2 208 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 ARHGAP10A1A4S6 786 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 SRRM3A6NNA2 597 aaPredicted RBP4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 PEX12O00623 359 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 TIMM23O14925 209 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 TSPAN3O60637 253 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 GAGE7O76087 117 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 GAGE12FP0CL80 117 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 GAGE12GP0CL81 117 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 GAGE12IP0CL82 117 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 PCNAP12004 261 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 BLKP51451 505 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 YWHAZP63104 245 aaKnown RBP4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 GAGE1Q13065 139 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 GAGE4Q13068 117 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 RUNX2Q13950 521 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 TUBB8Q3ZCM7 444 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 ANO1Q5XXA6 986 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 PRSS45Q7RTY3 260 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 RFLNBQ8N5W9 214 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 RFWD2Q8NHY2 731 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 GDPD5Q8WTR4 605 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 CNOT9Q92600 299 aaKnown RBP4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 BICD1Q96G01 975 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 HDAC6Q9UBN7 1215 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 MALT1Q9UDY8 824 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 FEM1BQ9UK73 627 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 COMMD10Q9Y6G5 202 aa4.56□□□□□ -1.68
CACNA1A-208ENST00000587451 CLGNO14967 610 aa4.55□□□□□ -1.68
CACNA1A-208ENST00000587451 RHBDL3P58872 404 aa4.55□□□□□ -1.68
CACNA1A-208ENST00000587451 GRSF1Q12849 480 aaKnown RBP eCLIP4.55□□□□□ -1.68
CACNA1A-208ENST00000587451 LURAP1LQ8IV03 231 aa4.55□□□□□ -1.68
CACNA1A-208ENST00000587451 FOXP4Q8IVH2 680 aaPredicted RBP4.55□□□□□ -1.68
CACNA1A-208ENST00000587451 CPXM2Q8N436 756 aa4.55□□□□□ -1.68
CACNA1A-208ENST00000587451 RAB40AQ8WXH6 277 aa4.55□□□□□ -1.68
CACNA1A-208ENST00000587451 INPP4AQ96PE3 977 aaPredicted RBP4.55□□□□□ -1.68
CACNA1A-208ENST00000587451 ZNF385AQ96PM9 386 aaKnown RBP4.55□□□□□ -1.68
CACNA1A-208ENST00000587451 EPYCQ99645 322 aa4.55□□□□□ -1.68
CACNA1A-208ENST00000587451 STN1Q9H668 368 aaKnown RBP4.55□□□□□ -1.68
CACNA1A-208ENST00000587451 NDRG3Q9UGV2 375 aa4.55□□□□□ -1.68
CACNA1A-208ENST00000587451 PCDHGB5Q9Y5G0 923 aa4.55□□□□□ -1.68
CACNA1A-208ENST00000587451 SCN5AQ14524 2016 aa4.55□□□□□ -1.68
CACNA1A-208ENST00000587451 C17orf113A0A1B0GUU1 675 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 MAGEA13PA6NCF6 341 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 ATP2C2O75185 946 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 F7P08709 466 aaPredicted RBP4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 IGHV4-30-4P0DP06 118 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 PTPN2P17706 415 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 CD72P21854 359 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 TTKP33981 857 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 TRAPPC10P48553 1259 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 ARL4CP56559 192 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 DDR1Q08345 913 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 DLG1Q12959 904 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 EFR3AQ14156 821 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 ZRSR1Q15695 479 aaKnown RBP4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 FAM76BQ5HYJ3 339 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 CES5AQ6NT32 575 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 GSG1LQ6UXU4 331 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 CCDC129Q6ZRS4 1044 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 SHFQ7M4L6 423 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 NEXN-AS1Q8NBZ9 246 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 IL17FQ96PD4 163 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 TCF7L2Q9NQB0 619 aa4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 TCF20Q9UGU0 1960 aaKnown RBP4.54□□□□□ -1.68
CACNA1A-208ENST00000587451 SH2D7A6NKC9 451 aaPredicted RBP4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 CEP104O60308 925 aa4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 NDUFB4O95168 129 aa4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 CNPP09543 421 aaKnown RBP4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 CD58P19256 250 aa4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 ACSM2AQ08AH3 577 aa4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 BIRC2Q13490 618 aa4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 DHX34Q14147 1143 aaKnown RBP4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 TAF5Q15542 800 aa4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 FBXO43Q4G163 708 aa4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 C10orf62Q5T681 223 aaPredicted RBP4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 NAPEPLDQ6IQ20 393 aa4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 RHBDF2Q6PJF5 856 aa4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 DSTYKQ6XUX3 929 aa4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 ZNF114Q8NC26 417 aa4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 COG8Q96MW5 612 aa4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 PYM1Q9BRP8 204 aaKnown RBP4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 EPHX3Q9H6B9 360 aa4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 CYSLTR2Q9NS75 346 aa4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 MDFICQ9P1T7 246 aa4.53□□□□□ -1.68
CACNA1A-208ENST00000587451 DOCK7Q96N67 2140 aa4.52□□□□□ -1.69
CACNA1A-208ENST00000587451 VWA3AA6NCI4 1184 aa4.52□□□□□ -1.69
CACNA1A-208ENST00000587451 B9A039 149 aa4.52□□□□□ -1.69
CACNA1A-208ENST00000587451 TIPRLO75663 272 aa4.52□□□□□ -1.69
CACNA1A-208ENST00000587451 DDNO94850 711 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms