RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 C3orf58Q8NDZ4 430 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 SPPL2BQ8TCT7 592 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 ZC3H15Q8WU90 426 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 SGF29Q96ES7 293 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 MS4A4AQ96JQ5 239 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 CNBD2Q96M20 576 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 SIK2Q9H0K1 926 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 EPS15L1Q9UBC2 864 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 CNOT11Q9UKZ1 510 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 KCNU1A8MYU2 1149 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 RNASEH2AO75792 299 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 IGLV3-25P01717 112 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 TCN1P20061 433 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 AFF1P51825 1210 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 CREB5Q02930 508 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 R3HDM1Q15032 1099 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 SLC5A9Q2M3M2 681 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 USP41Q3LFD5 358 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 PRAMEF19Q5SWL8 479 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 GK5Q6ZS86 529 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 FAM156AQ8NDB6 213 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 FAR2Q96K12 515 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 ZFRQ96KR1 1074 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 PPP1R2P1Q96PQ5 205 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 MRPS26Q9BYN8 205 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 IGSF5Q9NSI5 407 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 ARHGEF38Q9NXL2 777 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 GTSE1Q9NYZ3 720 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 FBXO5Q9UKT4 447 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 A0A1B0GVG6 124 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 NEMP2A6NFY4 417 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 VILLO15195 856 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 CPB1P15086 417 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 SLC12A2P55011 1212 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 PSME3P61289 254 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 CDKL1Q00532 357 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 TRIM25Q14258 630 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 GK3PQ14409 553 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 RANBP10Q6VN20 620 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 PLEKHH3Q7Z736 793 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 TLK2Q86UE8 772 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 LZTR1Q8N653 840 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 HMGCLL1Q8TB92 370 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 MYLPFQ96A32 169 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 TRPV6Q9H1D0 765 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 MEAF6Q9HAF1 191 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 CHST12Q9NRB3 414 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 ADA2Q9NZK5 511 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 SUCOQ9UBS9 1254 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 THP07101 528 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 PCSK1P29120 753 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 HOXC13P31276 330 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 STX5Q13190 355 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 FAM83EQ2M2I3 478 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 TECRLQ5HYJ1 363 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 C6orf52Q5T4I8 152 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 NEPROQ6NW34 567 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 KIAA0408Q6ZU52 694 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 USP50Q70EL3 339 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 SCML4Q8N228 414 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 GALNT4Q8N4A0 578 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 METTL25Q8N6Q8 603 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 LENG1Q96BZ8 264 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 NMD3Q96D46 503 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 CCDC126Q96EE4 140 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 GAD1Q99259 594 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 FSD1LQ9BXM9 530 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 PRKD2Q9BZL6 878 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 SLC39A8Q9C0K1 460 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 UNC93B1Q9H1C4 597 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 MRPL40Q9NQ50 206 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 APPL1Q9UKG1 709 aa14.32□□□□□ -0.12
CDK5RAP3-237ENST00000585163 AURKAO14965 403 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 FGF10O15520 208 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 PMPCBO75439 489 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 HLA-DQB2P05538 268 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 C8BP07358 591 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 FAM58BPP0C7Q3 252 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 ZNF26P17031 533 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 PFKPQ01813 784 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 LRP8Q14114 963 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 CSHL1Q14406 222 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 PSMD5Q16401 504 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 IL23RQ5VWK5 629 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 ARMC3Q5W041 872 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 PCDH20Q8N6Y1 951 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 TOP1MTQ969P6 601 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 MRGPRX2Q96LB1 330 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 RTP3Q9BQQ7 232 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 PTTG2Q9NZH5 202 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 RNF181Q9P0P0 153 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 SARDHQ9UL12 918 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 CCL15-CCL14A0A0B4J2E2 113 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 E7ENX8 843 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 IPO13O94829 963 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 KCNA5P22460 613 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 HTR7P34969 479 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 CHRNA4P43681 627 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 RPS6KA3P51812 740 aa14.31□□□□□ -0.12
CDK5RAP3-237ENST00000585163 C1QTNF8P60827 252 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms