RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 ABL2P42684 1182 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 AP1S1P61966 158 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 GBE1Q04446 702 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 SLC10A2Q12908 348 aaPredicted RBP16.44■□□□□ 0.22
ERBB2-222ENST00000584908 HNRNPDQ14103 355 aaKnown RBP16.44■□□□□ 0.22
ERBB2-222ENST00000584908 IFI16Q16666 785 aaKnown RBP16.44■□□□□ 0.22
ERBB2-222ENST00000584908 RALGPS1Q5JS13 557 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 ZFYVE27Q5T4F4 411 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 IL27RAQ6UWB1 636 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 KATNAL2Q8IYT4 538 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 MINDY1Q8N5J2 469 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 MAML1Q92585 1016 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 HDAC11Q96DB2 347 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 ECHDC3Q96DC8 303 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 FEM1CQ96JP0 617 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 SERAC1Q96JX3 654 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 SLC6A18Q96N87 628 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 MGME1Q9BQP7 344 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 GOLPH3Q9H4A6 298 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 ATP13A3Q9H7F0 1226 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 AMACRQ9UHK6 382 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 ANKRD6Q9Y2G4 727 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 PCNX2A6NKB5 2137 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 WNT9AO14904 365 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 MATN3O15232 486 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 PIGNO95427 931 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 WNT1P04628 370 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 ZNF883P0CG24 379 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 TIMP2P16035 220 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 ZFXP17010 805 aaPredicted RBP16.43■□□□□ 0.22
ERBB2-222ENST00000584908 CD38P28907 300 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 CDKN2BP42772 138 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 CTSKP43235 329 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 ATXN3P54252 364 aaPredicted RBP16.43■□□□□ 0.22
ERBB2-222ENST00000584908 RPS21P63220 83 aaKnown RBP16.43■□□□□ 0.22
ERBB2-222ENST00000584908 OVGP1Q12889 678 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 SLC14A1Q13336 389 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 ZNF235Q14590 738 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 MARC1Q5VT66 337 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 ALG1LQ6GMV1 187 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 TIGD7Q6NT04 549 aaPredicted RBP16.43■□□□□ 0.22
ERBB2-222ENST00000584908 BRAT1Q6PJG6 821 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 MFSD7Q6UXD7 560 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 DAAM2Q86T65 1068 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 IQCHQ86VS3 1027 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 BBS5Q8N3I7 341 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 TXLNBQ8N3L3 684 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 PGBD5Q8N414 524 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 LRRC57Q8N9N7 239 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 TMEM145Q8NBT3 493 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 NSMCE1Q8WV22 266 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 ASB12Q8WXK4 309 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 NSMCE3Q96MG7 304 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 NUDCD1Q96RS6 583 aa16.43■□□□□ 0.22
ERBB2-222ENST00000584908 GTPBP2Q9BX10 602 aaKnown RBP16.43■□□□□ 0.22
ERBB2-222ENST00000584908 SPTBN2O15020 2390 aa16.42■□□□□ 0.22
ERBB2-222ENST00000584908 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.42■□□□□ 0.22
ERBB2-222ENST00000584908 PRAMEF26H0Y7S4 382 aa16.42■□□□□ 0.22
ERBB2-222ENST00000584908 TRAFD1O14545 582 aaPredicted RBP16.42■□□□□ 0.22
ERBB2-222ENST00000584908 PCDH8O95206 1070 aa16.42■□□□□ 0.22
ERBB2-222ENST00000584908 CER1O95813 267 aa16.42■□□□□ 0.22
ERBB2-222ENST00000584908 SERPINA4P29622 427 aa16.42■□□□□ 0.22
ERBB2-222ENST00000584908 MAT2AP31153 395 aaKnown RBP16.42■□□□□ 0.22
ERBB2-222ENST00000584908 MMP13P45452 471 aa16.42■□□□□ 0.22
ERBB2-222ENST00000584908 UGP2Q16851 508 aa16.42■□□□□ 0.22
ERBB2-222ENST00000584908 KIF19Q2TAC6 998 aa16.42■□□□□ 0.22
ERBB2-222ENST00000584908 SEL1L3Q68CR1 1132 aa16.42■□□□□ 0.22
ERBB2-222ENST00000584908 ERMP1Q7Z2K6 904 aa16.42■□□□□ 0.22
ERBB2-222ENST00000584908 TTC7BQ86TV6 843 aa16.42■□□□□ 0.22
ERBB2-222ENST00000584908 CAMK1DQ8IU85 385 aa16.42■□□□□ 0.22
ERBB2-222ENST00000584908 MFSD2AQ8NA29 543 aa16.42■□□□□ 0.22
ERBB2-222ENST00000584908 RNF25Q96BH1 459 aaPredicted RBP16.42■□□□□ 0.22
ERBB2-222ENST00000584908 OLFM3Q96PB7 478 aa16.42■□□□□ 0.22
ERBB2-222ENST00000584908 C1QTNF2Q9BXJ5 285 aa16.42■□□□□ 0.22
ERBB2-222ENST00000584908 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.42■□□□□ 0.22
ERBB2-222ENST00000584908 APOL1O14791 398 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 HTRA2O43464 458 aaPredicted RBP16.41■□□□□ 0.22
ERBB2-222ENST00000584908 OPHN1O60890 802 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 HNRNPA2B1P22626 353 aaKnown RBP16.41■□□□□ 0.22
ERBB2-222ENST00000584908 CTNNA1P35221 906 aaKnown RBP16.41■□□□□ 0.22
ERBB2-222ENST00000584908 SCNN1BP51168 640 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 BCL2L1Q07817 233 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 PPIDQ08752 370 aaKnown RBP16.41■□□□□ 0.22
ERBB2-222ENST00000584908 ELP6Q0PNE2 266 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 ZNF423Q2M1K9 1284 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 HLA-BQ31612 363 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 TMEM52BQ4KMG9 183 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 SLC45A4Q5BKX6 768 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 KIAA1328Q86T90 577 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 ZSWIM9Q86XI8 627 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 RCOR2Q8IZ40 523 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 EXD1Q8NHP7 514 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.41■□□□□ 0.22
ERBB2-222ENST00000584908 SKA1Q96BD8 255 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 LENG8Q96PV6 779 aaPredicted RBP16.41■□□□□ 0.22
ERBB2-222ENST00000584908 MAK16Q9BXY0 300 aaKnown RBP16.41■□□□□ 0.22
ERBB2-222ENST00000584908 SLC17A9Q9BYT1 436 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 AASDHPPTQ9NRN7 309 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 GGT7Q9UJ14 662 aa16.41■□□□□ 0.22
ERBB2-222ENST00000584908 SNX11Q9Y5W9 270 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms