RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 TMEM145Q8NBT3 493 aa16.27■□□□□ 0.2
VAPA-204ENST00000577901 KLK6Q92876 244 aa16.27■□□□□ 0.2
VAPA-204ENST00000577901 BTBD6Q96KE9 485 aa16.27■□□□□ 0.2
VAPA-204ENST00000577901 FCRL3Q96P31 734 aaPredicted RBP16.27■□□□□ 0.2
VAPA-204ENST00000577901 MYOCQ99972 504 aa16.27■□□□□ 0.2
VAPA-204ENST00000577901 SPTLC3Q9NUV7 552 aa16.27■□□□□ 0.2
VAPA-204ENST00000577901 KLHL11Q9NVR0 708 aa16.27■□□□□ 0.2
VAPA-204ENST00000577901 DOCK4Q8N1I0 1966 aa16.27■□□□□ 0.19
VAPA-204ENST00000577901 ZSCAN5CA6NGD5 496 aaPredicted RBP16.26■□□□□ 0.19
VAPA-204ENST00000577901 K7ERQ8 282 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 KPNA3O00505 521 aaPredicted RBP16.26■□□□□ 0.19
VAPA-204ENST00000577901 KDELR3O43731 214 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 ZMPSTE24O75844 475 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 CTSLP07711 333 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 SSR1P43307 286 aaKnown RBP16.26■□□□□ 0.19
VAPA-204ENST00000577901 RECQLP46063 649 aaPredicted RBP16.26■□□□□ 0.19
VAPA-204ENST00000577901 SERPINH1P50454 418 aaKnown RBP16.26■□□□□ 0.19
VAPA-204ENST00000577901 ARF5P84085 180 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 DAB2P98082 770 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 CA9Q16790 459 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 HADHQ16836 314 aaKnown RBP16.26■□□□□ 0.19
VAPA-204ENST00000577901 ZNF284Q2VY69 593 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 PARP15Q460N3 678 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 HS1BP3Q53T59 392 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 NEK5Q6P3R8 708 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 KDM7AQ6ZMT4 941 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 OR2A12Q8NGT7 310 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 OR4C6Q8NH72 309 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 PACSIN1Q9BY11 444 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 CEP44Q9C0F1 390 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 ZWILCHQ9H900 591 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 UCKL1Q9NWZ5 548 aa16.26■□□□□ 0.19
VAPA-204ENST00000577901 FFAR2O15552 330 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 SMAD6O43541 496 aaKnown RBP16.25■□□□□ 0.19
VAPA-204ENST00000577901 MT-CO3P00414 261 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 AKT2P31751 481 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 CHRNA3P32297 505 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 ARL4AP40617 200 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 HCAR3P49019 387 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 NDST2P52849 883 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 CCDC15Q0P6D6 951 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 CCDC173Q0VFZ6 552 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 TBC1D25Q3MII6 688 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 RFX8Q6ZV50 586 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 CYP4V2Q6ZWL3 525 aaPredicted RBP16.25■□□□□ 0.19
VAPA-204ENST00000577901 HORMAD1Q86X24 394 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 UMODL1-AS1Q8N2C9 162 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 OR13H1Q8NG92 308 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 TEKT4Q8WW24 435 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 HSPH1Q92598 858 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 KCTD15Q96SI1 283 aaPredicted RBP16.25■□□□□ 0.19
VAPA-204ENST00000577901 CALN1Q9BXU9 219 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 FZD3Q9NPG1 666 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 DYRK4Q9NR20 520 aa16.25■□□□□ 0.19
VAPA-204ENST00000577901 MYLKQ15746 1914 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 RASA4BC9J798 803 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 H3BRJ5 948 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 RASA4O43374 803 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 BUB1O43683 1085 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 C1QL1O75973 258 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 PROSCO94903 275 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 HNRNPA2B1P22626 353 aaKnown RBP16.24■□□□□ 0.19
VAPA-204ENST00000577901 IL1R2P27930 398 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 DNA2P51530 1060 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 TLE3Q04726 772 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 DPYSL2Q16555 572 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 SMTNL2Q2TAL5 461 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 C22orf39Q6P5X5 142 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 GPR155Q7Z3F1 870 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 CCDC170Q8IYT3 715 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 PCDH20Q8N6Y1 951 aaKnown RBP16.24■□□□□ 0.19
VAPA-204ENST00000577901 CHST14Q8NCH0 376 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 LSM14AQ8ND56 463 aaKnown RBP16.24■□□□□ 0.19
VAPA-204ENST00000577901 TMIEQ8NEW7 156 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 SLC35G2Q8TBE7 412 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 ARRDC3Q96B67 414 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 PANX2Q96RD6 677 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 INTUQ9ULD6 942 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 PCDHB1Q9Y5F3 818 aa16.24■□□□□ 0.19
VAPA-204ENST00000577901 PIAS2O75928 621 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 PCDH8O95206 1070 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 ZIC2O95409 532 aaPredicted RBP16.23■□□□□ 0.19
VAPA-204ENST00000577901 PRNPP04156 253 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 RARAP10276 462 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 ALPPL2P10696 532 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 CKMT1AP12532 417 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 ERCC2P18074 760 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 CYLC1P35663 651 aaPredicted RBP16.23■□□□□ 0.19
VAPA-204ENST00000577901 ARHGAP25P42331 645 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 CLDN2P57739 230 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 SPA17Q15506 151 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 CARD16Q5EG05 197 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 ERN2Q76MJ5 926 aaKnown RBP16.23■□□□□ 0.19
VAPA-204ENST00000577901 SPACA3Q8IXA5 215 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 RHOT2Q8IXI1 618 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 CASKIN2Q8WXE0 1202 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 ISG20Q96AZ6 181 aaKnown RBP16.23■□□□□ 0.19
VAPA-204ENST00000577901 HMCESQ96FZ2 354 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 HDAC8Q9BY41 377 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 TNKS2Q9H2K2 1166 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms