RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 TBC1D3CQ6IPX1 549 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 BRAT1Q6PJG6 821 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TRIM69Q86WT6 500 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TBC1D3Q8IZP1 549 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TEX26Q8N6G2 289 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ALG3Q92685 438 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 P3H4Q92791 437 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 NUDCD1Q96RS6 583 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SUV39H2Q9H5I1 410 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 NT5MQ9NPB1 228 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SCUBE2Q9NQ36 999 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SEMA4GQ9NTN9 838 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PILRBQ9UKJ0 227 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ATXN2Q99700 1313 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 A0A1B0GTW7 788 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 A0A1W2PQ67 120 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TSPAN11A1L157 253 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 KHNYNO15037 678 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 MUSKO15146 869 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 INSIG1O15503 277 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 MTSS1O43312 755 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SOCS5O75159 536 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ZNF189O75820 626 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TJP3O95049 919 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PIGNO95427 931 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CCNB1P14635 433 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CR2P20023 1033 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CA4P22748 312 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 NFKBIAP25963 317 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CD27P26842 260 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 HOXD11P31277 338 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 RGRP47804 291 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 IFI35P80217 286 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 LMNB2Q03252 620 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ELP6Q0PNE2 266 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CCDC173Q0VFZ6 552 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 AP1B1Q10567 949 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 DUOXA1Q1HG43 343 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 KIAA1161Q6NSJ0 714 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 NPNTQ6UXI9 565 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PRPF39Q86UA1 669 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 HORMAD1Q86X24 394 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 DCLK2Q8N568 766 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 C12orf50Q8NA57 414 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 BIRC7Q96CA5 298 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 HES6Q96HZ4 224 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 LGMNQ99538 433 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 FERMT1Q9BQL6 677 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 NUSAP1Q9BXS6 441 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 MIR1-1HGQ9H1L0 117 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 RBM22Q9NW64 420 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TTLL3Q9Y4R7 772 aa12.85□□□□□ -0.35
CDK5RAP3-203ENST00000577442 DOCK9Q9BZ29 2069 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 UPK3BL1B0FP48 263 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 HACD1B0YJ81 288 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 UPK3BL2E5RIL1 263 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 NEMP1O14524 444 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 BCAT2O15382 392 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 DDX3YO15523 660 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 LATO43561 262 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TSPAN6O43657 245 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PCDH8O95206 1070 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CFIP05156 583 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 IGHV4-34P06331 123 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PECAM1P16284 738 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TAS2R38P59533 333 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 POLR2LP62875 67 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ITKQ08881 620 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 XRCC4Q13426 336 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PRKD1Q15139 912 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 LLGL1Q15334 1064 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 RPS6KA1Q15418 735 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TEAD4Q15561 434 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SETMARQ53H47 684 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TRIM61Q5EBN2 209 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SEL1L2Q5TEA6 688 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ALG1LQ6GMV1 187 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ERAP2Q6P179 960 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PRR23CQ6ZRP0 262 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CAMK1DQ8IU85 385 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ZCCHC9Q8N567 271 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TFB1MQ8WVM0 346 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 FEM1CQ96JP0 617 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 IL12RB2Q99665 862 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 HEMGNQ9BXL5 484 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 KCNF1Q9H3M0 494 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 EIF2B4Q9UI10 523 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PACSIN2Q9UNF0 486 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 DMTF1Q9Y222 760 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 FADS3Q9Y5Q0 445 aa12.84□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SPTBN2O15020 2390 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 ASCC3Q8N3C0 2202 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 A0A1W2PPC4 97 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 C10orf142B7Z368 130 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 KCNK1O00180 336 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 RNF103O00237 685 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 RNGTTO60942 597 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 JCHAINP01591 159 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 HLA-DQB2P05538 268 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 SERPINF2P08697 491 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms