RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 SLC25A51Q9H1U9 297 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 EFCAB1Q9HAE3 211 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 ARNT2Q9HBZ2 717 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 PAPOLBQ9NRJ5 636 aaKnown RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 NCKIPSDQ9NZQ3 722 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 DTNAQ9Y4J8 743 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 NLRC5Q86WI3 1866 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 TRPM7Q96QT4 1865 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 AURKAO14965 403 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 DUSP11O75319 330 aaKnown RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 HSPA1AP0DMV8 641 aaKnown RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 HSPA1BP0DMV9 641 aaKnown RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 AKR1A1P14550 325 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 CPB1P15086 417 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 WNT3AP56704 352 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 MS4A2Q01362 244 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 DSC3Q14574 896 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 TECRLQ5HYJ1 363 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 SH2D4BQ5SQS7 431 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 RBM20Q5T481 1227 aaKnown RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 OVOS1Q6IE37 1185 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 ZNF280DQ6N043 979 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 FBXL19Q6PCT2 694 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 SERINC5Q86VE9 423 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 TMEM126BQ8IUX1 230 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 THEM5Q8N1Q8 247 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 PELI3Q8N2H9 469 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 GALNT15Q8N3T1 639 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 ICA1LQ8NDH6 482 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 TRPV1Q8NER1 839 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 ZFAND2BQ8WV99 257 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 OLFM1Q99784 485 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 UNKQ9C0B0 810 aaKnown RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 ATXN3LQ9H3M9 355 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 POMKQ9H5K3 350 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 NOL6Q9H6R4 1146 aaKnown RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 WDR41Q9HAD4 459 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 NMUR1Q9HB89 426 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 FNIP2Q9P278 1114 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 NYNRINQ9P2P1 1898 aaKnown RBP9.02□□□□□ -0.96
NCBP3-204ENST00000574911 CAPNS1P04632 268 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 ENO3P13929 434 aaPredicted RBP9.02□□□□□ -0.97
NCBP3-204ENST00000574911 ME2P23368 584 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 LEPRP48357 1165 aaKnown RBP9.02□□□□□ -0.97
NCBP3-204ENST00000574911 RAB27AP51159 221 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 SLC12A2P55011 1212 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 MLLT6P55198 1093 aaPredicted RBP9.02□□□□□ -0.97
NCBP3-204ENST00000574911 TSPY1Q01534 308 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 FOLH1Q04609 750 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 SULT2A1Q06520 285 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 SEPT6Q14141 434 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 FLOT2Q14254 428 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 PDK3Q15120 406 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 SLC14A2Q15849 920 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 MMEL1Q495T6 779 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 ZNF789Q5FWF6 425 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 NOMO2Q5JPE7 1267 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 UGT2A3Q6UWM9 527 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 CHSY3Q70JA7 882 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 ST13P4Q8IZP2 240 aaPredicted RBP9.02□□□□□ -0.97
NCBP3-204ENST00000574911 ARHGAP18Q8N392 663 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 CEP70Q8NHQ1 597 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 HASPINQ8TF76 798 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 FATE1Q969F0 183 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 SGF29Q96ES7 293 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 IMP4Q96G21 291 aaKnown RBP9.02□□□□□ -0.97
NCBP3-204ENST00000574911 FAR2Q96K12 515 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 SUSD3Q96L08 255 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 C1orf74Q96LT6 269 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 MPP6Q9NZW5 540 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 BCAP29Q9UHQ4 241 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 IPO11Q9UI26 975 aaKnown RBP9.02□□□□□ -0.97
NCBP3-204ENST00000574911 RIMS3Q9UJD0 308 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 PADI3Q9ULW8 664 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 MRPL42Q9Y6G3 142 aaKnown RBP9.02□□□□□ -0.97
NCBP3-204ENST00000574911 NUP205Q92621 2012 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 A0A1W2PQH9 124 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 HEATR9A2RTY3 570 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 NEMP2A6NFY4 417 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 CFLARO15519 480 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 DENRO43583 198 aaKnown RBP9.02□□□□□ -0.97
NCBP3-204ENST00000574911 AP1G1O43747 822 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 BCAS2O75934 225 aaPredicted RBP9.02□□□□□ -0.97
NCBP3-204ENST00000574911 TYMPP19971 482 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 CD52P31358 61 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 GRIK1P39086 918 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 CLCN5P51795 746 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 PKNOX1P55347 436 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 TUSC3Q13454 348 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 ART3Q13508 389 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 ADGRE1Q14246 886 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 FAM83EQ2M2I3 478 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 GRAMD1BQ3KR37 738 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 LIN52Q52LA3 116 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 CWF19L1Q69YN2 538 aaKnown RBP9.02□□□□□ -0.97
NCBP3-204ENST00000574911 CXCL17Q6UXB2 119 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 KDELC2Q7Z4H8 507 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 TICAM1Q8IUC6 712 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 SPATA2LQ8IUW3 424 aaPredicted RBP9.02□□□□□ -0.97
NCBP3-204ENST00000574911 ZNF683Q8IZ20 524 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms