RNA–Protein interactions for RNA: ENST00000568936.1

CCNDBP1-214, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,088 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-214ENST00000568936 ZFYVE19Q96K21 471 aa11.74□□□□□ -0.53
CCNDBP1-214ENST00000568936 RPL10LQ96L21 214 aaKnown RBP11.74□□□□□ -0.53
CCNDBP1-214ENST00000568936 ASB16Q96NS5 453 aa11.74□□□□□ -0.53
CCNDBP1-214ENST00000568936 NSUN3Q9H649 340 aaKnown RBP11.74□□□□□ -0.53
CCNDBP1-214ENST00000568936 CLEC1BQ9P126 229 aa11.74□□□□□ -0.53
CCNDBP1-214ENST00000568936 SAMD15Q9P1V8 674 aa11.74□□□□□ -0.53
CCNDBP1-214ENST00000568936 KIAA1522Q9P206 1035 aaPredicted RBP11.74□□□□□ -0.53
CCNDBP1-214ENST00000568936 COL4A3Q01955 1670 aa11.74□□□□□ -0.53
CCNDBP1-214ENST00000568936 SPTBN5Q9NRC6 3674 aaKnown RBP11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 OTOL1A6NHN0 477 aaPredicted RBP11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 GOLGA8TH3BQL2 631 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 USP1O94782 785 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 PDHA1P08559 390 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 BRAFP15056 766 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 FCARP24071 287 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 ARNTP27540 789 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 STK19P49842 368 aaPredicted RBP11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 PLK1P53350 603 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 GALNT3Q14435 633 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 PITRM1Q5JRX3 1037 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 PCID2Q5JVF3 399 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 SPANXN3Q5MJ09 141 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 TMEM215Q68D42 235 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 ESRP1Q6NXG1 681 aaKnown RBP11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 PKN3Q6P5Z2 889 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 ELMSAN1Q6PJG2 1045 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 LRRC6Q86X45 466 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 CCNJLQ8IV13 435 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 CELF5Q8N6W0 485 aaKnown RBP11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 EFHBQ8N7U6 833 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 NAT16Q8N8M0 369 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 TTC17Q96AE7 1141 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 CERS2Q96G23 380 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 PPP1R2P1Q96PQ5 205 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 AGAP2Q99490 1192 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 NAT9Q9BTE0 207 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 NSRP1Q9H0G5 558 aaKnown RBP11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 DZANK1Q9NVP4 752 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 KCTD3Q9Y597 815 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 PCDHGC4Q9Y5F7 938 aa11.73□□□□□ -0.53
CCNDBP1-214ENST00000568936 CYBBP04839 570 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 CYP17A1P05093 508 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 PIRTP0C851 137 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 CDK18Q07002 472 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 MESP2Q0VG99 397 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 ADAM15Q13444 863 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 BMPR2Q13873 1038 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 EML3Q32P44 896 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 INO80DQ53TQ3 878 aaPredicted RBP11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 CHRDL2Q6WN34 429 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 SLC26A11Q86WA9 606 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 C12orf40Q86WS4 652 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 C10orf67Q8IYJ2 551 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 C4orf33Q8N1A6 199 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 OTUD6BQ8N6M0 293 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 DYDC1Q8WWB3 177 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 FEM1CQ96JP0 617 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 SERAC1Q96JX3 654 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 NUDCD1Q96RS6 583 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 KLF6Q99612 283 aaPredicted RBP11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 ZNF576Q9H609 170 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 TBC1D14Q9P2M4 693 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 CHKBQ9Y259 395 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 TCAF1Q9Y4C2 921 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 ANKRD65E5RJM6 399 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 TBX10O75333 385 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 SPAG7O75391 227 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 SERPINF2P08697 491 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 ARSAP15289 507 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 WEE1P30291 646 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 GKP32189 559 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 SERPINH1P50454 418 aaKnown RBP11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 TRAF2Q12933 501 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 PTPRCAPQ14761 206 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 DHCR24Q15392 516 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 GAB4Q2WGN9 574 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 DGKKQ5KSL6 1271 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 NCEH1Q6PIU2 408 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 SH2D5Q6ZV89 423 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 MARK2Q7KZI7 788 aaKnown RBP11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 PNPLA1Q8N8W4 532 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 OR6K2Q8NGY2 324 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 CABS1Q96KC9 395 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 C2orf49Q9BVC5 232 aaPredicted RBP11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 TM6SF2Q9BZW4 377 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 S1PR5Q9H228 398 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 RASSF4Q9H2L5 321 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 TRABDQ9H4I3 376 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 KCNK9Q9NPC2 374 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 SCUBE2Q9NQ36 999 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 TREX1Q9NSU2 369 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 SENP1Q9P0U3 644 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 ZMYM5Q9UJ78 669 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 SPO11Q9Y5K1 396 aa11.72□□□□□ -0.53
CCNDBP1-214ENST00000568936 DENND4AQ7Z401 1863 aa11.71□□□□□ -0.53
CCNDBP1-214ENST00000568936 A0A0U1RQS6 177 aa11.71□□□□□ -0.53
CCNDBP1-214ENST00000568936 MAGEB16A2A368 324 aa11.71□□□□□ -0.53
CCNDBP1-214ENST00000568936 GOLGA8RI6L899 631 aa11.71□□□□□ -0.53
CCNDBP1-214ENST00000568936 CCL22O00626 93 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms