RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 FANCGO15287 622 aa26.26■■□□□ 1.79
NME3-208ENST00000565379 LIASO43766 372 aa26.26■■□□□ 1.79
NME3-208ENST00000565379 STIP1P31948 543 aaKnown RBP26.26■■□□□ 1.79
NME3-208ENST00000565379 SFSWAPQ12872 951 aaKnown RBP26.26■■□□□ 1.79
NME3-208ENST00000565379 BYSLQ13895 437 aaKnown RBP26.26■■□□□ 1.79
NME3-208ENST00000565379 SIX1Q15475 284 aaPredicted RBP26.26■■□□□ 1.79
NME3-208ENST00000565379 TEX44Q53QW1 395 aa26.26■■□□□ 1.79
NME3-208ENST00000565379 FAM46CQ5VWP2 391 aa26.26■■□□□ 1.79
NME3-208ENST00000565379 TSEN2Q8NCE0 465 aaKnown RBP26.26■■□□□ 1.79
NME3-208ENST00000565379 TMIEQ8NEW7 156 aa26.26■■□□□ 1.79
NME3-208ENST00000565379 MS4A14Q96JA4 679 aa26.26■■□□□ 1.79
NME3-208ENST00000565379 HEPHQ9BQS7 1158 aa26.26■■□□□ 1.79
NME3-208ENST00000565379 TM6SF2Q9BZW4 377 aa26.26■■□□□ 1.79
NME3-208ENST00000565379 POLR1EQ9GZS1 481 aaKnown RBP26.26■■□□□ 1.79
NME3-208ENST00000565379 TNKS2Q9H2K2 1166 aa26.26■■□□□ 1.79
NME3-208ENST00000565379 HECAQ9UBI9 543 aaPredicted RBP26.26■■□□□ 1.79
NME3-208ENST00000565379 TRHDEQ9UKU6 1024 aa26.26■■□□□ 1.79
NME3-208ENST00000565379 SCML1Q9UN30 329 aa26.26■■□□□ 1.79
NME3-208ENST00000565379 KCNK1O00180 336 aa26.25■■□□□ 1.79
NME3-208ENST00000565379 KHNYNO15037 678 aaKnown RBP26.25■■□□□ 1.79
NME3-208ENST00000565379 JCHAINP01591 159 aa26.25■■□□□ 1.79
NME3-208ENST00000565379 PRNPP04156 253 aa26.25■■□□□ 1.79
NME3-208ENST00000565379 VAV1P15498 845 aa26.25■■□□□ 1.79
NME3-208ENST00000565379 AP1S1P61966 158 aa26.25■■□□□ 1.79
NME3-208ENST00000565379 ST3GAL2Q16842 350 aa26.25■■□□□ 1.79
NME3-208ENST00000565379 MYLK3Q32MK0 819 aa26.25■■□□□ 1.79
NME3-208ENST00000565379 ZNF776Q68DI1 518 aaPredicted RBP26.25■■□□□ 1.79
NME3-208ENST00000565379 DPY19L3Q6ZPD9 716 aa26.25■■□□□ 1.79
NME3-208ENST00000565379 CREG2Q8IUH2 290 aa26.25■■□□□ 1.79
NME3-208ENST00000565379 STK40Q8N2I9 435 aa26.25■■□□□ 1.79
NME3-208ENST00000565379 TUBGCP5Q96RT8 1024 aa26.25■■□□□ 1.79
NME3-208ENST00000565379 CPEB1Q9BZB8 566 aaKnown RBP26.25■■□□□ 1.79
NME3-208ENST00000565379 IL36AQ9UHA7 158 aa26.25■■□□□ 1.79
NME3-208ENST00000565379 ANGPTL2Q9UKU9 493 aa26.25■■□□□ 1.79
NME3-208ENST00000565379 DRG1Q9Y295 367 aaKnown RBP26.25■■□□□ 1.79
NME3-208ENST00000565379 ATP8A1Q9Y2Q0 1164 aa26.25■■□□□ 1.79
NME3-208ENST00000565379 ASCC3Q8N3C0 2202 aaKnown RBP26.24■■□□□ 1.79
NME3-208ENST00000565379 C1QTNF3-AMACRE9PGA6 284 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 ZNF185O15231 689 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 BNIP3LO60238 219 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 RBL1P28749 1068 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 CHRNA3P32297 505 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 CCNHP51946 323 aaPredicted RBP26.24■■□□□ 1.79
NME3-208ENST00000565379 COPAP53621 1224 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 TUBB2AQ13885 445 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 TRIM61Q5EBN2 209 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 ALG1LQ6GMV1 187 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 TMPRSS6Q8IU80 811 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 RYBPQ8N488 228 aaPredicted RBP26.24■■□□□ 1.79
NME3-208ENST00000565379 NUDCD1Q96RS6 583 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 FAM129BQ96TA1 746 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 TUBB2BQ9BVA1 445 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 OSBPL1AQ9BXW6 950 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 MTG2Q9H4K7 406 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 NT5MQ9NPB1 228 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 SEPT10Q9P0V9 454 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 PILRBQ9UKJ0 227 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 DNPEPQ9ULA0 475 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 PPM1HQ9ULR3 514 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 NUMA1Q14980 2115 aa26.24■■□□□ 1.79
NME3-208ENST00000565379 KRIT1O00522 736 aa26.23■■□□□ 1.79
NME3-208ENST00000565379 CDX4O14627 284 aaPredicted RBP26.23■■□□□ 1.79
NME3-208ENST00000565379 KCNK5O95279 499 aa26.23■■□□□ 1.79
NME3-208ENST00000565379 ADH1BP00325 375 aa26.23■■□□□ 1.79
NME3-208ENST00000565379 ITGAVP06756 1048 aa26.23■■□□□ 1.79
NME3-208ENST00000565379 PTPN3P26045 913 aa26.23■■□□□ 1.79
NME3-208ENST00000565379 PMLP29590 882 aa26.23■■□□□ 1.79
NME3-208ENST00000565379 OASLQ15646 514 aaKnown RBP26.23■■□□□ 1.79
NME3-208ENST00000565379 SRLQ86TD4 932 aa26.23■■□□□ 1.79
NME3-208ENST00000565379 SYT12Q8IV01 421 aa26.23■■□□□ 1.79
NME3-208ENST00000565379 KIF18AQ8NI77 898 aa26.23■■□□□ 1.79
NME3-208ENST00000565379 LRRN4Q8WUT4 740 aa26.23■■□□□ 1.79
NME3-208ENST00000565379 C1orf54Q8WWF1 131 aa26.23■■□□□ 1.79
NME3-208ENST00000565379 PRCCQ92733 491 aaPredicted RBP26.23■■□□□ 1.79
NME3-208ENST00000565379 TEKT5Q96M29 485 aa26.23■■□□□ 1.79
NME3-208ENST00000565379 HSPA12BQ96MM6 686 aa26.23■■□□□ 1.79
NME3-208ENST00000565379 FAM118BQ9BPY3 351 aa26.23■■□□□ 1.79
NME3-208ENST00000565379 CACNA1EQ15878 2313 aa26.22■■□□□ 1.79
NME3-208ENST00000565379 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP26.22■■□□□ 1.79
NME3-208ENST00000565379 RNF103O00237 685 aa26.22■■□□□ 1.79
NME3-208ENST00000565379 KCNN4O15554 427 aa26.22■■□□□ 1.79
NME3-208ENST00000565379 CR2P20023 1033 aa26.22■■□□□ 1.79
NME3-208ENST00000565379 WASHC5Q12768 1159 aa26.22■■□□□ 1.79
NME3-208ENST00000565379 ZBTB17Q13105 803 aa26.22■■□□□ 1.79
NME3-208ENST00000565379 CYP1B1Q16678 543 aa26.22■■□□□ 1.79
NME3-208ENST00000565379 SLC36A4Q6YBV0 504 aa26.22■■□□□ 1.79
NME3-208ENST00000565379 PRELID2Q8N945 189 aa26.22■■□□□ 1.79
NME3-208ENST00000565379 ATG4AQ8WYN0 398 aa26.22■■□□□ 1.79
NME3-208ENST00000565379 SIPA1Q96FS4 1042 aa26.22■■□□□ 1.79
NME3-208ENST00000565379 USP29Q9HBJ7 922 aa26.22■■□□□ 1.79
NME3-208ENST00000565379 SCUBE2Q9NQ36 999 aa26.22■■□□□ 1.79
NME3-208ENST00000565379 ZNF148Q9UQR1 794 aa26.22■■□□□ 1.79
NME3-208ENST00000565379 ADAMTS9Q9P2N4 1935 aa26.22■■□□□ 1.79
NME3-208ENST00000565379 MUSKO15146 869 aa26.21■■□□□ 1.79
NME3-208ENST00000565379 INSIG1O15503 277 aa26.21■■□□□ 1.79
NME3-208ENST00000565379 ZNF217O75362 1048 aa26.21■■□□□ 1.79
NME3-208ENST00000565379 DNTTP04053 509 aa26.21■■□□□ 1.79
NME3-208ENST00000565379 HLA-DQB2P05538 268 aa26.21■■□□□ 1.79
NME3-208ENST00000565379 SCNN1BP51168 640 aa26.21■■□□□ 1.79
NME3-208ENST00000565379 SHC2P98077 582 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms