RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ADGRA2Q96PE1 1338 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 TRIM64CA6NLI5 447 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 CLOCKO15516 846 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 PRPSAP2O60256 369 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 MSCO60682 206 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 ITGB3P05106 788 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 PIGFQ07326 219 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 OXA1LQ15070 435 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 INAVAQ3KP66 663 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 CCDC153Q494R4 210 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 IER5Q5VY09 327 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 OR6B2Q6IFH4 312 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 STRA8Q7Z7C7 330 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 MCUQ8NE86 351 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 MS4A4AQ96JQ5 239 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 PTPN18Q99952 460 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 NMRAL1Q9HBL8 299 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.43■□□□□ 0.22
LINC00554-201ENST00000564841 SPO11Q9Y5K1 396 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 FAM155AB1AL88 458 aaPredicted RBP16.43■□□□□ 0.22
LINC00554-201ENST00000564841 PHGDHO43175 533 aaKnown RBP16.43■□□□□ 0.22
LINC00554-201ENST00000564841 HCRTO43612 131 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 ENDOD1O94919 500 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 LGALS2P05162 132 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 C2P06681 752 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 SLC7A1P30825 629 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 POLR2BP30876 1174 aaKnown RBP16.43■□□□□ 0.22
LINC00554-201ENST00000564841 HPCAL1P37235 193 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 NR4A2P43354 598 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 RAD23AP54725 363 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 CLCQ05315 142 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 AMHR2Q16671 573 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 CLIP4Q8N3C7 705 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 FAM167AQ96KS9 214 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 LGMNQ99538 433 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 OAZ3Q9UMX2 235 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 CNTFP26441 200 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 NME5P56597 212 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 NSUN2Q08J23 767 aaKnown RBP eCLIP16.43■□□□□ 0.22
LINC00554-201ENST00000564841 SELENBP1Q13228 472 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 CAMK2BQ13554 666 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 RNF19BQ6ZMZ0 732 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 SPPL2CQ8IUH8 684 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 BRSK2Q8IWQ3 736 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.43■□□□□ 0.22
LINC00554-201ENST00000564841 GLT1D1Q96MS3 346 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 HGH1Q9BTY7 390 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 CXCL16Q9H2A7 254 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 TRAF6Q9Y4K3 522 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 TLL2Q9Y6L7 1015 aa16.43■□□□□ 0.22
LINC00554-201ENST00000564841 ASB14A6NK59 587 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 ZNF701M0R085 212 aaPredicted RBP16.42■□□□□ 0.22
LINC00554-201ENST00000564841 PFDN6O15212 129 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 SNAP91O60641 907 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 JRKO75564 520 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 ALDH1A2O94788 518 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 ESRRBO95718 433 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 YWHAEP62258 255 aaKnown RBP16.42■□□□□ 0.22
LINC00554-201ENST00000564841 LSMEM2Q8N112 164 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 SNX19Q92543 992 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 SLC45A3Q96JT2 553 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 ERAP1Q9NZ08 941 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 TCAF1Q9Y4C2 921 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 V9GYQ6 96 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 HEATR9A2RTY3 570 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 H0YJX3 145 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 SBK3P0C264 359 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 HNRNPLP14866 589 aaKnown RBP eCLIP16.42■□□□□ 0.22
LINC00554-201ENST00000564841 MYF6P23409 242 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 SLC7A2P52569 658 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 HUNKP57058 714 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 ARHGAP1Q07960 439 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 ZNF460Q14592 562 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 SPCS2Q15005 226 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 PDK2Q15119 407 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 ZIK1Q3SY52 487 aaPredicted RBP16.42■□□□□ 0.22
LINC00554-201ENST00000564841 AGKQ53H12 422 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 ATF7IP2Q5U623 682 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 GPR142Q7Z601 462 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 C2orf69Q8N8R5 385 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 ABHD11Q8NFV4 315 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 ADAMTS16Q8TE57 1224 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 TCF12Q99081 682 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 IL12RB2Q99665 862 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 ZNF518BQ9C0D4 1074 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 ELOVL4Q9GZR5 314 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 TASP1Q9H6P5 420 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 FAM49BQ9NUQ9 324 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 RAP2CQ9Y3L5 183 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 STYXL1Q9Y6J8 313 aa16.42■□□□□ 0.22
LINC00554-201ENST00000564841 TCRBV3S1A0A5B6 114 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 FAM47E-STBD1D6RA91 191 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 EI24O14681 340 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 PAPSS1O43252 624 aaPredicted RBP16.41■□□□□ 0.22
LINC00554-201ENST00000564841 CLPXO76031 633 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 MZF1P28698 734 aaPredicted RBP16.41■□□□□ 0.22
LINC00554-201ENST00000564841 OXTRP30559 389 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 CDH5P33151 784 aaPredicted RBP16.41■□□□□ 0.22
LINC00554-201ENST00000564841 RAB15P59190 212 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 FPGSQ05932 587 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms