RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 CHRNA4P43681 627 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 RPL26P61254 145 aaKnown RBP11.93□□□□□ -0.5
ABCA3-203ENST00000563623 NOMO2Q5JPE7 1267 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 NOTUMQ6P988 496 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 STYXQ8WUJ0 223 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 CANT1Q8WVQ1 401 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 TRIM8Q9BZR9 551 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 PAIP1Q9H074 479 aaKnown RBP11.93□□□□□ -0.5
ABCA3-203ENST00000563623 HSFX1Q9UBD0 423 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 GIMAP2Q9UG22 337 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 NUDT5Q9UKK9 219 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 TRIM43BA6NCK2 446 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 PLOD2O00469 737 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 XPOTO43592 962 aaKnown RBP11.92□□□□□ -0.5
ABCA3-203ENST00000563623 TADA2AO75478 443 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 CDH2P19022 906 aaPredicted RBP11.92□□□□□ -0.5
ABCA3-203ENST00000563623 FAM187BQ17R55 369 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 FUT11Q495W5 492 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 TWF2Q6IBS0 349 aaKnown RBP11.92□□□□□ -0.5
ABCA3-203ENST00000563623 OSTM1Q86WC4 334 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 CENPLQ8N0S6 344 aaPredicted RBP11.92□□□□□ -0.5
ABCA3-203ENST00000563623 LSMEM2Q8N112 164 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 RDH11Q8TC12 318 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 OSBPL11Q9BXB4 747 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 DUSP16Q9BY84 665 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 SPAG4Q9NPE6 437 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 NSMCE4AQ9NXX6 385 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 FBXO5Q9UKT4 447 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 PTPRFP10586 1907 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 SMIM28A0A1B0GU29 152 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 NOL3O60936 208 aaKnown RBP11.92□□□□□ -0.5
ABCA3-203ENST00000563623 SLC25A27O95847 323 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 CD4P01730 458 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 CAPRIN1Q14444 709 aaKnown RBP11.92□□□□□ -0.5
ABCA3-203ENST00000563623 PAFAH1B3Q15102 231 aaKnown RBP11.92□□□□□ -0.5
ABCA3-203ENST00000563623 RBM20Q5T481 1227 aaKnown RBP11.92□□□□□ -0.5
ABCA3-203ENST00000563623 ARHGAP36Q6ZRI8 547 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 CLEC14AQ86T13 490 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 CBR4Q8N4T8 237 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 LRRC52Q8N7C0 313 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 KDM1BQ8NB78 822 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 SNX27Q96L92 541 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 NPY6RQ99463 290 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 TBL1YQ9BQ87 522 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 EPB41L1Q9H4G0 881 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 TRHDEQ9UKU6 1024 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 CNOT6Q9ULM6 557 aaKnown RBP11.92□□□□□ -0.5
ABCA3-203ENST00000563623 RNF11Q9Y3C5 154 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 TSC22D4Q9Y3Q8 395 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 PRORSD1PA6NEY8 169 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 AURKAO14965 403 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 DCLK1O15075 740 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 MTSS1O43312 755 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 NDUFB5O43674 189 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 LRIG2O94898 1065 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 PAMP19021 973 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 ATP5F1P24539 256 aaPredicted RBP11.92□□□□□ -0.5
ABCA3-203ENST00000563623 PAN2Q504Q3 1202 aaKnown RBP11.92□□□□□ -0.5
ABCA3-203ENST00000563623 PIWIL4Q7Z3Z4 852 aaKnown RBP11.92□□□□□ -0.5
ABCA3-203ENST00000563623 CUZD1Q86UP6 607 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 TMEM102Q8N9M5 508 aaPredicted RBP11.92□□□□□ -0.5
ABCA3-203ENST00000563623 ASB9Q96DX5 294 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 UNC93B1Q9H1C4 597 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 ALG9Q9H6U8 611 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 EML4Q9HC35 981 aaKnown RBP11.92□□□□□ -0.5
ABCA3-203ENST00000563623 PNPLA3Q9NST1 481 aa11.92□□□□□ -0.5
ABCA3-203ENST00000563623 ADM5C9JUS6 153 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 ANGPT2O15123 496 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 AP1G1O43747 822 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 IL10P22301 178 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 GABRB3P28472 473 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 HADHAP40939 763 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 SLC1A2P43004 574 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 NDST2P52849 883 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 NEDD8Q15843 81 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 SV2CQ496J9 727 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 FBXO48Q5FWF7 155 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 PCID2Q5JVF3 399 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 NEPROQ6NW34 567 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 LINC00523Q86TU6 105 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 SPPL2CQ8IUH8 684 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 OFCC1Q8IZS5 231 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 RBM22Q9NW64 420 aaKnown RBP eCLIP11.91□□□□□ -0.5
ABCA3-203ENST00000563623 TBC1D30Q9Y2I9 924 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 TMA7Q9Y2S6 64 aaKnown RBP11.91□□□□□ -0.5
ABCA3-203ENST00000563623 ASB14A6NK59 587 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 ERI2A8K979 691 aaKnown RBP11.91□□□□□ -0.5
ABCA3-203ENST00000563623 NRP2O60462 931 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 TFPTP0C1Z6 253 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 CYP2C9P11712 490 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 CPB1P15086 417 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 ENTPD1P49961 510 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 CACNB2Q08289 660 aaPredicted RBP11.91□□□□□ -0.5
ABCA3-203ENST00000563623 DPYSQ14117 519 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 SAMD4BQ5PRF9 694 aaKnown RBP11.91□□□□□ -0.5
ABCA3-203ENST00000563623 PKN3Q6P5Z2 889 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 TEKT5Q96M29 485 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 TIMMDC1Q9NPL8 285 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 CACNA2D2Q9NY47 1150 aa11.91□□□□□ -0.5
ABCA3-203ENST00000563623 FNDC3AQ9Y2H6 1198 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms