RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 OPA1O60313 960 aa16.41■□□□□ 0.22
SNX1-213ENST00000561026 MMP20O60882 483 aa16.41■□□□□ 0.22
SNX1-213ENST00000561026 MBD3O95983 291 aa16.41■□□□□ 0.22
SNX1-213ENST00000561026 TIMP2P16035 220 aa16.41■□□□□ 0.22
SNX1-213ENST00000561026 JUNDP17535 347 aa16.41■□□□□ 0.22
SNX1-213ENST00000561026 HTR7P34969 479 aa16.41■□□□□ 0.22
SNX1-213ENST00000561026 EIF2S3P41091 472 aaKnown RBP16.41■□□□□ 0.22
SNX1-213ENST00000561026 DUSP3P51452 185 aaPredicted RBP16.41■□□□□ 0.22
SNX1-213ENST00000561026 TYRO3Q06418 890 aa16.41■□□□□ 0.22
SNX1-213ENST00000561026 EIF2B5Q13144 721 aaKnown RBP16.41■□□□□ 0.22
SNX1-213ENST00000561026 COL9A2Q14055 689 aaPredicted RBP16.41■□□□□ 0.22
SNX1-213ENST00000561026 CYTH1Q15438 398 aa16.41■□□□□ 0.22
SNX1-213ENST00000561026 CDCP2Q5VXM1 449 aa16.41■□□□□ 0.22
SNX1-213ENST00000561026 PPP1R2P3Q6NXS1 205 aa16.41■□□□□ 0.22
SNX1-213ENST00000561026 NAT10Q9H0A0 1025 aaKnown RBP16.41■□□□□ 0.22
SNX1-213ENST00000561026 LRRC19Q9H756 370 aa16.41■□□□□ 0.22
SNX1-213ENST00000561026 RTN4Q9NQC3 1192 aaKnown RBP16.41■□□□□ 0.22
SNX1-213ENST00000561026 PARVAQ9NVD7 372 aa16.41■□□□□ 0.22
SNX1-213ENST00000561026 EVA1BQ9NVM1 165 aa16.41■□□□□ 0.22
SNX1-213ENST00000561026 DONSONQ9NYP3 566 aa16.41■□□□□ 0.22
SNX1-213ENST00000561026 FASNP49327 2511 aaKnown RBP16.41■□□□□ 0.22
SNX1-213ENST00000561026 INSIG1O15503 277 aa16.4■□□□□ 0.22
SNX1-213ENST00000561026 AQP9O43315 295 aa16.4■□□□□ 0.22
SNX1-213ENST00000561026 TM7SF2O76062 418 aa16.4■□□□□ 0.22
SNX1-213ENST00000561026 ITIH2P19823 946 aa16.4■□□□□ 0.22
SNX1-213ENST00000561026 SUOXP51687 545 aa16.4■□□□□ 0.22
SNX1-213ENST00000561026 TPI1P60174 286 aa16.4■□□□□ 0.22
SNX1-213ENST00000561026 PTK2BQ14289 1009 aa16.4■□□□□ 0.22
SNX1-213ENST00000561026 SOWAHCQ53LP3 525 aaPredicted RBP16.4■□□□□ 0.22
SNX1-213ENST00000561026 PLEKHA7Q6IQ23 1121 aa16.4■□□□□ 0.22
SNX1-213ENST00000561026 ZCCHC8Q6NZY4 707 aaKnown RBP16.4■□□□□ 0.22
SNX1-213ENST00000561026 VPS36Q86VN1 386 aa16.4■□□□□ 0.22
SNX1-213ENST00000561026 HCAR2Q8TDS4 363 aa16.4■□□□□ 0.22
SNX1-213ENST00000561026 CXorf40AQ8TE69 158 aa16.4■□□□□ 0.22
SNX1-213ENST00000561026 BTN2A2Q8WVV5 523 aa16.4■□□□□ 0.22
SNX1-213ENST00000561026 C1QTNF7Q9BXJ2 289 aa16.4■□□□□ 0.22
SNX1-213ENST00000561026 LHX3Q9UBR4 397 aa16.4■□□□□ 0.22
SNX1-213ENST00000561026 UBA2Q9UBT2 640 aaPredicted RBP16.4■□□□□ 0.22
SNX1-213ENST00000561026 TMCO5BA8MYB1 307 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 EIF3CLB5ME19 914 aaKnown RBP16.39■□□□□ 0.21
SNX1-213ENST00000561026 TOR1BO14657 336 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 TPP1O14773 563 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 BRINP1O60477 761 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 PSMA2P25787 234 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 IGFALSP35858 605 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 ABCG1P45844 678 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 NDST2P52849 883 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 THOP1P52888 689 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 YPEL5P62699 121 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 DNAAF5Q86Y56 855 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 ARFGAP1Q8N6T3 406 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 SNIP1Q8TAD8 396 aaKnown RBP16.39■□□□□ 0.21
SNX1-213ENST00000561026 LMX1AQ8TE12 382 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 FGF11Q92914 225 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 CRELD1Q96HD1 420 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 EXOC2Q96KP1 924 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 EIF3CQ99613 913 aaKnown RBP16.39■□□□□ 0.21
SNX1-213ENST00000561026 WRAP53Q9BUR4 548 aaKnown RBP16.39■□□□□ 0.21
SNX1-213ENST00000561026 ABCG4Q9H172 646 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 PDFQ9HBH1 243 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 MBNL1Q9NR56 388 aaKnown RBP16.39■□□□□ 0.21
SNX1-213ENST00000561026 GPATCH2LQ9NWQ4 482 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 NCKIPSDQ9NZQ3 722 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 SPASTQ9UBP0 616 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 SALL4Q9UJQ4 1053 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 PCDHB1Q9Y5F3 818 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 BAHCC1Q9P281 2608 aa16.39■□□□□ 0.21
SNX1-213ENST00000561026 TMEM191CA6NGB0 347 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 LRRC53A6NM62 1247 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 J3KR12 359 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 RIOK3O14730 519 aaKnown RBP16.38■□□□□ 0.21
SNX1-213ENST00000561026 RRP8O43159 456 aaKnown RBP16.38■□□□□ 0.21
SNX1-213ENST00000561026 PRAMEF11O60813 436 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 PIGNO95427 931 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 XPAP23025 273 aaPredicted RBP16.38■□□□□ 0.21
SNX1-213ENST00000561026 ITPKBP27987 946 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 ELP6Q0PNE2 266 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 GRM3Q14832 879 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 CDKN3Q16667 212 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 KLHL40Q2TBA0 621 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 DEFB133Q30KQ1 61 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 TMEM52BQ4KMG9 183 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 ANO6Q4KMQ2 910 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 ERMARDQ5T6L9 678 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 TP53I13Q8NBR0 393 aaPredicted RBP16.38■□□□□ 0.21
SNX1-213ENST00000561026 IFI44Q8TCB0 444 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 CELF6Q96J87 481 aaKnown RBP16.38■□□□□ 0.21
SNX1-213ENST00000561026 IL12RB2Q99665 862 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 NCAPGQ9BPX3 1015 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 BPIFA3Q9BQP9 254 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 TCEAL2Q9H3H9 227 aaPredicted RBP16.38■□□□□ 0.21
SNX1-213ENST00000561026 SUV39H2Q9H5I1 410 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 DHX35Q9H5Z1 703 aaKnown RBP16.38■□□□□ 0.21
SNX1-213ENST00000561026 TMEM63CQ9P1W3 806 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 APOBEC3BQ9UH17 382 aaKnown RBP16.38■□□□□ 0.21
SNX1-213ENST00000561026 PNMA8BQ9ULN7 279 aaPredicted RBP16.38■□□□□ 0.21
SNX1-213ENST00000561026 AP4E1Q9UPM8 1137 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 TSPAN11A1L157 253 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 EEF2KO00418 725 aaKnown RBP16.38■□□□□ 0.21
SNX1-213ENST00000561026 GCATO75600 419 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms