RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 NEMP1O14524 444 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 TEX33O43247 280 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 OPA1O60313 960 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 IGSF6O95976 241 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 ALPPL2P10696 532 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 ABCG1P45844 678 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 YBEYP58557 167 aaPredicted RBP18.11■□□□□ 0.49
RPL28-210ENST00000560583 RHOAP61586 193 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 SGCGQ13326 291 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 HS1BP3Q53T59 392 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 INO80DQ53TQ3 878 aaPredicted RBP18.11■□□□□ 0.49
RPL28-210ENST00000560583 ACAD10Q6JQN1 1059 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 IRF2BP2Q7Z5L9 587 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 ZNF354CQ86Y25 554 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 UMODL1-AS1Q8N2C9 162 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 CASKIN2Q8WXE0 1202 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 EPAS1Q99814 870 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 LRRC19Q9H756 370 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 GPATCH2LQ9NWQ4 482 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 MFHAS1Q9Y4C4 1052 aa18.11■□□□□ 0.49
RPL28-210ENST00000560583 RP1P56715 2156 aa18.1■□□□□ 0.49
RPL28-210ENST00000560583 ATMINO43313 823 aaPredicted RBP18.1■□□□□ 0.49
RPL28-210ENST00000560583 AQP9O43315 295 aa18.1■□□□□ 0.49
RPL28-210ENST00000560583 MMP20O60882 483 aa18.1■□□□□ 0.49
RPL28-210ENST00000560583 PIGNO95427 931 aa18.1■□□□□ 0.49
RPL28-210ENST00000560583 GP1BAP07359 652 aa18.1■□□□□ 0.49
RPL28-210ENST00000560583 FERP16591 822 aa18.1■□□□□ 0.49
RPL28-210ENST00000560583 AIF1P55008 147 aa18.1■□□□□ 0.49
RPL28-210ENST00000560583 CYTH1Q15438 398 aa18.1■□□□□ 0.49
RPL28-210ENST00000560583 CA9Q16790 459 aa18.1■□□□□ 0.49
RPL28-210ENST00000560583 PARP15Q460N3 678 aa18.1■□□□□ 0.49
RPL28-210ENST00000560583 E4F1Q66K89 784 aaPredicted RBP18.1■□□□□ 0.49
RPL28-210ENST00000560583 VPS36Q86VN1 386 aa18.1■□□□□ 0.49
RPL28-210ENST00000560583 ARFGAP1Q8N6T3 406 aa18.1■□□□□ 0.49
RPL28-210ENST00000560583 TP53I13Q8NBR0 393 aaPredicted RBP18.1■□□□□ 0.49
RPL28-210ENST00000560583 ARHGEF26Q96DR7 871 aa18.1■□□□□ 0.49
RPL28-210ENST00000560583 PEBP4Q96S96 227 aa18.1■□□□□ 0.49
RPL28-210ENST00000560583 DUSP23Q9BVJ7 150 aa18.1■□□□□ 0.49
RPL28-210ENST00000560583 MBNL1Q9NR56 388 aaKnown RBP18.1■□□□□ 0.49
RPL28-210ENST00000560583 DKK3Q9UBP4 350 aa18.1■□□□□ 0.49
RPL28-210ENST00000560583 TSPAN11A1L157 253 aa18.09■□□□□ 0.49
RPL28-210ENST00000560583 NEMP2A6NFY4 417 aa18.09■□□□□ 0.49
RPL28-210ENST00000560583 H3BM21 787 aa18.09■□□□□ 0.49
RPL28-210ENST00000560583 FGF10O15520 208 aaPredicted RBP18.09■□□□□ 0.49
RPL28-210ENST00000560583 TIMP2P16035 220 aa18.09■□□□□ 0.49
RPL28-210ENST00000560583 JUNDP17535 347 aa18.09■□□□□ 0.49
RPL28-210ENST00000560583 DEFB133Q30KQ1 61 aa18.09■□□□□ 0.49
RPL28-210ENST00000560583 ZCCHC8Q6NZY4 707 aaKnown RBP18.09■□□□□ 0.49
RPL28-210ENST00000560583 CYP4V2Q6ZWL3 525 aaPredicted RBP18.09■□□□□ 0.49
RPL28-210ENST00000560583 TTC7BQ86TV6 843 aa18.09■□□□□ 0.49
RPL28-210ENST00000560583 DNAAF5Q86Y56 855 aa18.09■□□□□ 0.49
RPL28-210ENST00000560583 IFI44Q8TCB0 444 aa18.09■□□□□ 0.49
RPL28-210ENST00000560583 WRAP53Q9BUR4 548 aaKnown RBP18.09■□□□□ 0.49
RPL28-210ENST00000560583 LRRC61Q9BV99 259 aa18.09■□□□□ 0.49
RPL28-210ENST00000560583 CATSPERBQ9H7T0 1116 aa18.09■□□□□ 0.49
RPL28-210ENST00000560583 USP29Q9HBJ7 922 aa18.09■□□□□ 0.49
RPL28-210ENST00000560583 AP4E1Q9UPM8 1137 aa18.09■□□□□ 0.49
RPL28-210ENST00000560583 CSNK1G3Q9Y6M4 447 aa18.09■□□□□ 0.49
RPL28-210ENST00000560583 BPTFQ12830 3046 aa18.08■□□□□ 0.49
RPL28-210ENST00000560583 ANKRD62A6NC57 917 aa18.08■□□□□ 0.48
RPL28-210ENST00000560583 J3KR12 359 aa18.08■□□□□ 0.48
RPL28-210ENST00000560583 LZTS3O60299 673 aaPredicted RBP18.08■□□□□ 0.48
RPL28-210ENST00000560583 GCATO75600 419 aa18.08■□□□□ 0.48
RPL28-210ENST00000560583 RGRP47804 291 aa18.08■□□□□ 0.48
RPL28-210ENST00000560583 TPI1P60174 286 aa18.08■□□□□ 0.48
RPL28-210ENST00000560583 MAMLD1Q13495 774 aa18.08■□□□□ 0.48
RPL28-210ENST00000560583 IRF4Q15306 451 aa18.08■□□□□ 0.48
RPL28-210ENST00000560583 CDKN3Q16667 212 aa18.08■□□□□ 0.48
RPL28-210ENST00000560583 SKOR2Q2VWA4 1001 aaPredicted RBP18.08■□□□□ 0.48
RPL28-210ENST00000560583 TBC1D25Q3MII6 688 aa18.08■□□□□ 0.48
RPL28-210ENST00000560583 PLEKHA7Q6IQ23 1121 aa18.08■□□□□ 0.48
RPL28-210ENST00000560583 GUSBP11Q6P575 273 aa18.08■□□□□ 0.48
RPL28-210ENST00000560583 DCUN1D2Q6PH85 259 aa18.08■□□□□ 0.48
RPL28-210ENST00000560583 ZSWIM9Q86XI8 627 aa18.08■□□□□ 0.48
RPL28-210ENST00000560583 LMX1AQ8TE12 382 aa18.08■□□□□ 0.48
RPL28-210ENST00000560583 CELF6Q96J87 481 aaKnown RBP18.08■□□□□ 0.48
RPL28-210ENST00000560583 CPEB1Q9BZB8 566 aaKnown RBP18.08■□□□□ 0.48
RPL28-210ENST00000560583 TRIM7Q9C029 511 aa18.08■□□□□ 0.48
RPL28-210ENST00000560583 UBA2Q9UBT2 640 aaPredicted RBP18.08■□□□□ 0.48
RPL28-210ENST00000560583 APOBEC3BQ9UH17 382 aaKnown RBP18.08■□□□□ 0.48
RPL28-210ENST00000560583 IPO11Q9UI26 975 aaKnown RBP18.08■□□□□ 0.48
RPL28-210ENST00000560583 SHROOM3Q8TF72 1996 aa18.08■□□□□ 0.48
RPL28-210ENST00000560583 LRRC53A6NM62 1247 aa18.07■□□□□ 0.48
RPL28-210ENST00000560583 GOLGA6L19H0YKK7 550 aa18.07■□□□□ 0.48
RPL28-210ENST00000560583 CASC3O15234 703 aaKnown RBP18.07■□□□□ 0.48
RPL28-210ENST00000560583 PRAMEF11O60813 436 aa18.07■□□□□ 0.48
RPL28-210ENST00000560583 CSO75390 466 aaKnown RBP18.07■□□□□ 0.48
RPL28-210ENST00000560583 TM7SF2O76062 418 aa18.07■□□□□ 0.48
RPL28-210ENST00000560583 SERPINC1P01008 464 aa18.07■□□□□ 0.48
RPL28-210ENST00000560583 RAD51Q06609 339 aa18.07■□□□□ 0.48
RPL28-210ENST00000560583 TMEM52BQ4KMG9 183 aa18.07■□□□□ 0.48
RPL28-210ENST00000560583 MACC1Q6ZN28 852 aa18.07■□□□□ 0.48
RPL28-210ENST00000560583 NYAP1Q6ZVC0 841 aa18.07■□□□□ 0.48
RPL28-210ENST00000560583 PHACTR4Q8IZ21 702 aa18.07■□□□□ 0.48
RPL28-210ENST00000560583 CXorf40AQ8TE69 158 aa18.07■□□□□ 0.48
RPL28-210ENST00000560583 SNRNP25Q9BV90 132 aaKnown RBP18.07■□□□□ 0.48
RPL28-210ENST00000560583 BOCQ9BWV1 1114 aa18.07■□□□□ 0.48
RPL28-210ENST00000560583 PRORYQ9H606 182 aa18.07■□□□□ 0.48
RPL28-210ENST00000560583 MYO6Q9UM54 1294 aa18.07■□□□□ 0.48
RPL28-210ENST00000560583 COQ6Q9Y2Z9 468 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms