RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 BTBD1Q9H0C5 482 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 BRD8Q9H0E9 1235 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 USP29Q9HBJ7 922 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 SGK2Q9HBY8 427 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 RBM22Q9NW64 420 aaKnown RBP eCLIP11.56□□□□□ -0.56
SNX1-204ENST00000559061 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.56□□□□□ -0.56
SNX1-204ENST00000559061 DKK3Q9UBP4 350 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 PILRBQ9UKJ0 227 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 FADS3Q9Y5Q0 445 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 MYLKQ15746 1914 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 ZNF292O60281 2723 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 PI4KAP42356 2102 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 TRPM6Q9BX84 2022 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 DMXL1Q9Y485 3027 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 GVINP1Q7Z2Y8 2422 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 LATO43561 262 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 FZD6O60353 706 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 ATP1A1P05023 1023 aaKnown RBP11.55□□□□□ -0.56
SNX1-204ENST00000559061 PDHA1P08559 390 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 RBL1P28749 1068 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 DHPSP49366 369 aaPredicted RBP11.55□□□□□ -0.56
SNX1-204ENST00000559061 SCNN1BP51168 640 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 NEK3P51956 506 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 AP1S1P61966 158 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 SKOR1P84550 965 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 BNC1Q01954 994 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 SEMG2Q02383 582 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 AP1B1Q10567 949 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 RALGDSQ12967 914 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 BYSLQ13895 437 aaKnown RBP11.55□□□□□ -0.56
SNX1-204ENST00000559061 ZNF235Q14590 738 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 RPS6KA1Q15418 735 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 KCTD19Q17RG1 926 aaPredicted RBP11.55□□□□□ -0.56
SNX1-204ENST00000559061 TMEM259Q4ZIN3 620 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 SLC45A4Q5BKX6 768 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 SPDYCQ5MJ68 293 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 SEL1L3Q68CR1 1132 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 KIAA0895LQ68EN5 471 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 KDM7AQ6ZMT4 941 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 PRPF39Q86UA1 669 aaKnown RBP11.55□□□□□ -0.56
SNX1-204ENST00000559061 C11orf74Q86VG3 221 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 SLC13A5Q86YT5 568 aaPredicted RBP11.55□□□□□ -0.56
SNX1-204ENST00000559061 CCNYQ8ND76 341 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 TRIM58Q8NG06 486 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 OR2T34Q8NGX1 318 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 OR14C36Q8NHC7 312 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 SLC35B2Q8TB61 432 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 ATG4AQ8WYN0 398 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 ANP32BQ92688 251 aaKnown RBP11.55□□□□□ -0.56
SNX1-204ENST00000559061 P3H4Q92791 437 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 LOXL4Q96JB6 756 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 TUBGCP5Q96RT8 1024 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 WDR24Q96S15 920 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 SEMA3CQ99985 751 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 OSBPL1AQ9BXW6 950 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 CARD9Q9H257 536 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 ARRDC1-AS1Q9H2J1 176 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 SUV39H2Q9H5I1 410 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 FSCN3Q9NQT6 498 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 KCND1Q9NSA2 647 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 RXFP3Q9NSD7 469 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 PCDHGC4Q9Y5F7 938 aa11.55□□□□□ -0.56
SNX1-204ENST00000559061 EP300Q09472 2414 aaPredicted RBP11.54□□□□□ -0.56
SNX1-204ENST00000559061 A0A0U1RQS6 177 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 FAM47DPA6NHR8 397 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 KCNK3O14649 394 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 PPP1R12AO14974 1030 aaPredicted RBP11.54□□□□□ -0.56
SNX1-204ENST00000559061 ZBTB24O43167 697 aaPredicted RBP11.54□□□□□ -0.56
SNX1-204ENST00000559061 AP1G1O43747 822 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 NRDCO43847 1150 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 GFRA3O60609 400 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 RHOBTB1O94844 696 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 RETP07949 1114 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 CXCR5P32302 372 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 HSPA9P38646 679 aaKnown RBP11.54□□□□□ -0.56
SNX1-204ENST00000559061 MPLP40238 635 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 RENBPP51606 427 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 GDF10P55107 478 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 SPEM2Q0P670 501 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 XRCC4Q13426 336 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 ELF2Q15723 593 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 ZNF284Q2VY69 593 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 ZNF569Q5MCW4 686 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 LYSMD4Q5XG99 296 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 LAYNQ6UX15 382 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 TRIM69Q86WT6 500 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 ZNF567Q8N184 647 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.54□□□□□ -0.56
SNX1-204ENST00000559061 GANCQ8TET4 914 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 COG1Q8WTW3 980 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 TFB1MQ8WVM0 346 aaKnown RBP11.54□□□□□ -0.56
SNX1-204ENST00000559061 PIH1D2Q8WWB5 315 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 IMP4Q96G21 291 aaKnown RBP11.54□□□□□ -0.56
SNX1-204ENST00000559061 TEKT5Q96M29 485 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 ZNF641Q96N77 438 aaPredicted RBP11.54□□□□□ -0.56
SNX1-204ENST00000559061 ALS2CR12Q96Q35 445 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 TRIB3Q96RU7 358 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 TDRD1Q9BXT4 1180 aaKnown RBP11.54□□□□□ -0.56
SNX1-204ENST00000559061 PCED1AQ9H1Q7 454 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 CAAP1Q9H8G2 361 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms