RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 UGT2B4P06133 528 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 TNNT1P13805 278 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 ZFXP17010 805 aaPredicted RBP12.65□□□□□ -0.38
SLIRP-211ENST00000557623 MX2P20592 715 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 GKP32189 559 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 MAPK8P45983 427 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 NAP1L1P55209 391 aaKnown RBP12.65□□□□□ -0.38
SLIRP-211ENST00000557623 TAS2R38P59533 333 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 RACK1P63244 317 aaKnown RBP12.65□□□□□ -0.38
SLIRP-211ENST00000557623 GALNT2Q10471 571 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 ZNF235Q14590 738 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 IFI16Q16666 785 aaKnown RBP12.65□□□□□ -0.38
SLIRP-211ENST00000557623 SETMARQ53H47 684 aaPredicted RBP12.65□□□□□ -0.38
SLIRP-211ENST00000557623 SLC45A4Q5BKX6 768 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 PARS2Q7L3T8 475 aaKnown RBP12.65□□□□□ -0.38
SLIRP-211ENST00000557623 ADAT2Q7Z6V5 191 aaKnown RBP12.65□□□□□ -0.38
SLIRP-211ENST00000557623 DAAM2Q86T65 1068 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 SRLQ86TD4 932 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 TP53INP2Q8IXH6 220 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 RMDN1Q96DB5 314 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 EXOC2Q96KP1 924 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 ZNF641Q96N77 438 aaPredicted RBP12.65□□□□□ -0.38
SLIRP-211ENST00000557623 ZNF830Q96NB3 372 aaPredicted RBP12.65□□□□□ -0.38
SLIRP-211ENST00000557623 PSKH2Q96QS6 385 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 ORAI3Q9BRQ5 295 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 HAUS2Q9NVX0 235 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 DKK3Q9UBP4 350 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 HYOU1Q9Y4L1 999 aa12.65□□□□□ -0.38
SLIRP-211ENST00000557623 CACNA1EQ15878 2313 aa12.65□□□□□ -0.39
SLIRP-211ENST00000557623 C4orf47A7E2U8 309 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 CDX4O14627 284 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-211ENST00000557623 TSPAN6O43657 245 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 XPAP23025 273 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-211ENST00000557623 SERPINA4P29622 427 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 GARSP41250 739 aaKnown RBP12.64□□□□□ -0.39
SLIRP-211ENST00000557623 SUOXP51687 545 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 PPP2CBP62714 309 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 RPS21P63220 83 aaKnown RBP12.64□□□□□ -0.39
SLIRP-211ENST00000557623 PPP2CAP67775 309 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 SLC10A7Q0GE19 358 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 KIF5AQ12840 1032 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 GRIK2Q13002 908 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 RALGPS1Q5JS13 557 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 CFAP58Q5T655 872 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 MARC1Q5VT66 337 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 NAPEPLDQ6IQ20 393 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 KIAA1161Q6NSJ0 714 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 TTC7BQ86TV6 843 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 HORMAD1Q86X24 394 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 PQLC3Q8N755 202 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 TSEN2Q8NCE0 465 aaKnown RBP12.64□□□□□ -0.39
SLIRP-211ENST00000557623 ACRBPQ8NEB7 543 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 CCDC112Q8NEF3 446 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 TPCN2Q8NHX9 752 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 FATE1Q969F0 183 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 FEM1CQ96JP0 617 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 SERAC1Q96JX3 654 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 GTPBP2Q9BX10 602 aaKnown RBP12.64□□□□□ -0.39
SLIRP-211ENST00000557623 SUV39H2Q9H5I1 410 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 ATP13A3Q9H7F0 1226 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 AASDHPPTQ9NRN7 309 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 TFR2Q9UP52 801 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 REXO2Q9Y3B8 237 aaKnown RBP12.64□□□□□ -0.39
SLIRP-211ENST00000557623 FADS3Q9Y5Q0 445 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 LRRK1Q38SD2 2015 aa12.64□□□□□ -0.39
SLIRP-211ENST00000557623 ZNF292O60281 2723 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.63□□□□□ -0.39
SLIRP-211ENST00000557623 A0A1W2PQU0 124 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 C3orf70A6NLC5 250 aaPredicted RBP12.63□□□□□ -0.39
SLIRP-211ENST00000557623 PRAMEF26H0Y7S4 382 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 NEMP1O14524 444 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 APOL1O14791 398 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 INSIG1O15503 277 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 MAGEC1O60732 1142 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 OPHN1O60890 802 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 CER1O95813 267 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 PEX11BO96011 259 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 CCNCP24863 283 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 CD38P28907 300 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 MAT2AP31153 395 aaKnown RBP12.63□□□□□ -0.39
SLIRP-211ENST00000557623 MMP13P45452 471 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 CSNK1EP49674 416 aaKnown RBP12.63□□□□□ -0.39
SLIRP-211ENST00000557623 SCNN1BP51168 640 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 C21orf59P57076 290 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 AP1S1P61966 158 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 BCL2L1Q07817 233 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 HNRNPDQ14103 355 aaKnown RBP12.63□□□□□ -0.39
SLIRP-211ENST00000557623 TFDP2Q14188 446 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 SLC9A4Q6AI14 798 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 BRAT1Q6PJG6 821 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 BZW1Q7L1Q6 419 aaKnown RBP12.63□□□□□ -0.39
SLIRP-211ENST00000557623 RFX6Q8HWS3 928 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 KATNAL2Q8IYT4 538 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 RCOR2Q8IZ40 523 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 MINDY1Q8N5J2 469 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 KIAA1524Q8TCG1 905 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 HDAC11Q96DB2 347 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 SLC6A18Q96N87 628 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 TSGA13Q96PP4 275 aa12.63□□□□□ -0.39
SLIRP-211ENST00000557623 EBF2Q9HAK2 575 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms