RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 ATOH1Q92858 354 aaPredicted RBP4.91□□□□□ -1.62
PRPF39-212ENST00000557477 CUL5Q93034 780 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 SAAL1Q96ER3 474 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 SIGLEC11Q96RL6 698 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 ITPAQ9BY32 194 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 GLIS2Q9BZE0 524 aaPredicted RBP4.91□□□□□ -1.62
PRPF39-212ENST00000557477 TMEM184CQ9NVA4 438 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 BABAM1Q9NWV8 329 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 AGO2Q9UKV8 859 aaKnown RBP4.91□□□□□ -1.62
PRPF39-212ENST00000557477 SCINQ9Y6U3 715 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 SCAF11Q99590 1463 aaKnown RBP4.91□□□□□ -1.62
PRPF39-212ENST00000557477 LRRC7Q96NW7 1537 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 ADGRF5Q8IZF2 1346 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 ZNF644Q9H582 1327 aaPredicted RBP4.91□□□□□ -1.62
PRPF39-212ENST00000557477 TIAM1Q13009 1591 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 DHX29Q7Z478 1369 aaKnown RBP4.91□□□□□ -1.62
PRPF39-212ENST00000557477 DEPDC5O75140 1603 aa4.9□□□□□ -1.62
PRPF39-212ENST00000557477 MIA2Q96PC5 1412 aa4.9□□□□□ -1.62
PRPF39-212ENST00000557477 CAMSAP2Q08AD1 1489 aa4.9□□□□□ -1.62
PRPF39-212ENST00000557477 A0A0G2JK05 382 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 KIR2DS5A0A0G2JLQ3 304 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.9□□□□□ -1.63
PRPF39-212ENST00000557477 FAM157AC9JC47 383 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 KIR2DS3K7RE56 304 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 ADAM10O14672 748 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 SLC25A17O43808 307 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 GFPT2O94808 682 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 MLYCDO95822 493 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 SCGB1D1O95968 90 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 LCKP06239 509 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 SPARCP09486 303 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 CERS1P27544 350 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 POU1F1P28069 291 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 HOXD9P28356 352 aaPredicted RBP4.9□□□□□ -1.63
PRPF39-212ENST00000557477 ARL1P40616 181 aaPredicted RBP4.9□□□□□ -1.63
PRPF39-212ENST00000557477 DPP6P42658 865 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 CLCNKBP51801 687 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 DAZAP2Q15038 168 aaPredicted RBP4.9□□□□□ -1.63
PRPF39-212ENST00000557477 TTC39AQ5SRH9 613 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 SERTAD4-AS1Q5TG53 156 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 ASPHD1Q5U4P2 390 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 KIAA1614Q5VZ46 1190 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 FAM205BPQ63HN1 556 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 ISM2Q6H9L7 571 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 SLC18B1Q6NT16 456 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 KDELC2Q7Z4H8 507 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 YTHDF3Q7Z739 585 aaKnown RBP4.9□□□□□ -1.63
PRPF39-212ENST00000557477 GPAT4Q86UL3 456 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 IGFN1Q86VF2 1251 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 SLC25A41Q8N5S1 370 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 LRRC57Q8N9N7 239 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 C11orf65Q8NCR3 313 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 CADM4Q8NFZ8 388 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 OR4N2Q8NGD1 307 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 TREX2Q9BQ50 279 aaPredicted RBP4.9□□□□□ -1.63
PRPF39-212ENST00000557477 THSD1Q9NS62 852 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 FLRT1Q9NZU1 646 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 MKLN1Q9UL63 735 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 PCDHGB5Q9Y5G0 923 aa4.9□□□□□ -1.63
PRPF39-212ENST00000557477 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.89□□□□□ -1.63
PRPF39-212ENST00000557477 A0A1W2PPC1 479 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 ANKRD18BA2A2Z9 1011 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 DYTNA2CJ06 578 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 A6NCN8 305 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 PTP4A3O75365 173 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 SEC31AO94979 1220 aaKnown RBP4.89□□□□□ -1.63
PRPF39-212ENST00000557477 ACADMP11310 421 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 UNGP13051 313 aaPredicted RBP4.89□□□□□ -1.63
PRPF39-212ENST00000557477 LAMP2P13473 410 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 SLC2A4P14672 509 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 YWHAQP27348 245 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 BSGP35613 385 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 SLC16A2P36021 539 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 PBX3P40426 434 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 DRG2P55039 364 aaKnown RBP4.89□□□□□ -1.63
PRPF39-212ENST00000557477 EIF3BP55884 814 aaKnown RBP4.89□□□□□ -1.63
PRPF39-212ENST00000557477 TMPRSS3P57727 454 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 TMEM115Q12893 351 aaPredicted RBP4.89□□□□□ -1.63
PRPF39-212ENST00000557477 EIF4A2Q14240 407 aaKnown RBP4.89□□□□□ -1.63
PRPF39-212ENST00000557477 TAF11Q15544 211 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 SMTNL2Q2TAL5 461 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 HMBOX1Q6NT76 420 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 SLC2A7Q6PXP3 512 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 FASTKD5Q7L8L6 764 aaKnown RBP4.89□□□□□ -1.63
PRPF39-212ENST00000557477 SLC46A3Q7Z3Q1 461 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 ADSSL1Q8N142 457 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 DPP10Q8N608 796 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 ZMIZ2Q8NF64 920 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 RASSF8Q8NHQ8 419 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 TMEM170AQ8WVE7 144 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 TUBB6Q9BUF5 446 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 NUF2Q9BZD4 464 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 SCPEP1Q9HB40 452 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 WDR6Q9NNW5 1121 aaKnown RBP4.89□□□□□ -1.63
PRPF39-212ENST00000557477 PNRC2Q9NPJ4 139 aaKnown RBP4.89□□□□□ -1.63
PRPF39-212ENST00000557477 DIAPH3Q9NSV4 1193 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 MSRB1Q9NZV6 116 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 CAPN7Q9Y6W3 813 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 CLSPNQ9HAW4 1339 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 ZC3H13Q5T200 1668 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms