RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 CCDC13Q8IYE1 715 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 KIAA2013Q8IYS2 634 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 TBC1D3Q8IZP1 549 aaPredicted RBP10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 PGBD5Q8N414 524 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 ZCCHC9Q8N567 271 aaKnown RBP10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 C12orf50Q8NA57 414 aaPredicted RBP10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 MAML1Q92585 1016 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 P3H4Q92791 437 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 TCEAL3Q969E4 200 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 VOPP1Q96AW1 172 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 HAUS1Q96CS2 278 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 OLFM3Q96PB7 478 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 TSGA13Q96PP4 275 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 TUBGCP5Q96RT8 1024 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 MGME1Q9BQP7 344 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 HEMGNQ9BXL5 484 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 CPEB1Q9BZB8 566 aaKnown RBP10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 KCNF1Q9H3M0 494 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 KDM4CQ9H3R0 1056 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 ATP13A3Q9H7F0 1226 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 PREBQ9HCU5 417 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 NT5MQ9NPB1 228 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 SCUBE2Q9NQ36 999 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 VPS45Q9NRW7 570 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 TMEM74BQ9NUR3 256 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 HAUS2Q9NVX0 235 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 SAE1Q9UBE0 346 aaPredicted RBP10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 SUSD2Q9UGT4 822 aa10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 EIF2B4Q9UI10 523 aaKnown RBP10.71□□□□□ -0.69
HNRNPC-232ENST00000557442 CABIN1Q9Y6J0 2220 aa10.71□□□□□ -0.7
HNRNPC-232ENST00000557442 LRP4O75096 1905 aa10.71□□□□□ -0.7
HNRNPC-232ENST00000557442 TTC24A2A3L6 582 aaPredicted RBP10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 PATE3B3GLJ2 98 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 KCNK1O00180 336 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 DDX3YO15523 660 aaKnown RBP10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 PCDH8O95206 1070 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 ZNF806P0C7X5 589 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 CCNB1P14635 433 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 GNSP15586 552 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 XPAP23025 273 aaPredicted RBP10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 MAT2AP31153 395 aaKnown RBP10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 PTPN7P35236 360 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 ABL2P42684 1182 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 NR2C2P49116 596 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 BCL2L1Q07817 233 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 ITKQ08881 620 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 NSUN2Q08J23 767 aaKnown RBP eCLIP10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 ZNF211Q13398 564 aaPredicted RBP10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 SF3A2Q15428 464 aaKnown RBP10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 TRIM61Q5EBN2 209 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 PEAR1Q5VY43 1037 aaPredicted RBP10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 AADACL2Q6P093 401 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 PRR23CQ6ZRP0 262 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 BBS12Q6ZW61 710 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 BZW1Q7L1Q6 419 aaKnown RBP10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 RABEPKQ7Z6M1 372 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 CAMK1DQ8IU85 385 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 TEX26Q8N6G2 289 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 GPR161Q8N6U8 529 aaKnown RBP10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 DNASE2BQ8WZ79 361 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 FATE1Q969F0 183 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 HES6Q96HZ4 224 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 NUDCD1Q96RS6 583 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 OSBPL8Q9BZF1 889 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 POLR1EQ9GZS1 481 aaKnown RBP10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 SUV39H2Q9H5I1 410 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 RBM22Q9NW64 420 aaKnown RBP eCLIP10.7□□□□□ -0.74e-23■■■■■ 28.1
HNRNPC-232ENST00000557442 SEPT10Q9P0V9 454 aa10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 ZFC3H1O60293 1989 aaKnown RBP10.7□□□□□ -0.7
HNRNPC-232ENST00000557442 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 APOC4-APOC2K7ER74 178 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 NEMP1O14524 444 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 KHNYNO15037 678 aaKnown RBP10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 BCAT2O15382 392 aaPredicted RBP10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 RNGTTO60942 597 aaKnown RBP10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 APOC2P02655 101 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 HLA-DQB2P05538 268 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 PYGMP11217 842 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 CR2P20023 1033 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 CD27P26842 260 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 CCR5P51681 352 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 IFI35P80217 286 aaPredicted RBP10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 ZBTB17Q13105 803 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 DUOXA1Q1HG43 343 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 AASDHQ4L235 1098 aaPredicted RBP10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 SETMARQ53H47 684 aaPredicted RBP10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 BRAT1Q6PJG6 821 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 B4GALNT4Q76KP1 1039 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 ZC3H18Q86VM9 953 aaKnown RBP10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 TRIM69Q86WT6 500 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 TRIM58Q8NG06 486 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 CEP76Q8TAP6 659 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 PDCD6IPQ8WUM4 868 aaKnown RBP10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 TFB1MQ8WVM0 346 aaKnown RBP10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 RAB7BQ96AH8 199 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 ZNF641Q96N77 438 aaPredicted RBP10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 SEMA3CQ99985 751 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 HERPUD2Q9BSE4 406 aa10.69□□□□□ -0.7
HNRNPC-232ENST00000557442 CEP41Q9BYV8 373 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms