RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 DLL3Q9NYJ7 618 aa10.81□□□□□ -0.68
LINC00239-201ENST00000556973 DTLQ9NZJ0 730 aa10.81□□□□□ -0.68
LINC00239-201ENST00000556973 AMACRQ9UHK6 382 aa10.81□□□□□ -0.68
LINC00239-201ENST00000556973 HEY1Q9Y5J3 304 aa10.81□□□□□ -0.68
LINC00239-201ENST00000556973 ADGRG1Q9Y653 693 aa10.81□□□□□ -0.68
LINC00239-201ENST00000556973 PCDH15Q96QU1 1955 aa10.81□□□□□ -0.68
LINC00239-201ENST00000556973 PI4KAP42356 2102 aa10.81□□□□□ -0.68
LINC00239-201ENST00000556973 FRYLO94915 3013 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 SDK1Q7Z5N4 2213 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 A0A1W2PQ67 120 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 TSPAN11A1L157 253 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 CCDC66A2RUB6 948 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 C4orf47A7E2U8 309 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 PRAMEF26H0Y7S4 382 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 NEMP1O14524 444 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 SLC30A4O14863 429 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 MUSKO15146 869 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 VILLO15195 856 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 NRDCO43847 1150 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 PIGNO95427 931 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 CCNB1P14635 433 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 TIMP2P16035 220 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 CR2P20023 1033 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 XPAP23025 273 aaPredicted RBP10.8□□□□□ -0.68
LINC00239-201ENST00000556973 CES1P23141 567 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 CTNNA2P26232 953 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 CD38P28907 300 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 MAT2AP31153 395 aaKnown RBP10.8□□□□□ -0.68
LINC00239-201ENST00000556973 CTNNA1P35221 906 aaKnown RBP10.8□□□□□ -0.68
LINC00239-201ENST00000556973 MMP13P45452 471 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 NR2C2P49116 596 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 CSNK1EP49674 416 aaKnown RBP10.8□□□□□ -0.68
LINC00239-201ENST00000556973 COPS2P61201 443 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 AP1S1P61966 158 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 PPP2CBP62714 309 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 POLR2LP62875 67 aaKnown RBP10.8□□□□□ -0.68
LINC00239-201ENST00000556973 PPP2CAP67775 309 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 PUM1Q14671 1186 aaKnown RBP eCLIP10.8□□□□□ -0.68
LINC00239-201ENST00000556973 STAT4Q14765 748 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 UGP2Q16851 508 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 ZNF284Q2VY69 593 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 SLC45A4Q5BKX6 768 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 CFAP58Q5T655 872 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 BRAT1Q6PJG6 821 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 IL27RAQ6UWB1 636 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 ADAT2Q7Z6V5 191 aaKnown RBP10.8□□□□□ -0.68
LINC00239-201ENST00000556973 HORMAD1Q86X24 394 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 CAMK1DQ8IU85 385 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 CCDC13Q8IYE1 715 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 PGBD5Q8N414 524 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 LRRC57Q8N9N7 239 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 UBE2Q2Q8WVN8 375 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 RMDN1Q96DB5 314 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 SERAC1Q96JX3 654 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 MGME1Q9BQP7 344 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 GTPBP2Q9BX10 602 aaKnown RBP10.8□□□□□ -0.68
LINC00239-201ENST00000556973 TSGA10Q9BZW7 698 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 BRD8Q9H0E9 1235 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 SCUBE2Q9NQ36 999 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 FSCN3Q9NQT6 498 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 AASDHPPTQ9NRN7 309 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 ZFR2Q9UPR6 939 aaKnown RBP10.8□□□□□ -0.68
LINC00239-201ENST00000556973 ANKRD6Q9Y2G4 727 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 DOCK9Q9BZ29 2069 aa10.8□□□□□ -0.68
LINC00239-201ENST00000556973 A0A1W2PR77 199 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 MACROD2A1Z1Q3 448 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 GRID2IPA4D2P6 1211 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 TM4SF5O14894 197 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 PPP1R12AO14974 1030 aaPredicted RBP10.79□□□□□ -0.68
LINC00239-201ENST00000556973 AREL1O15033 823 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 KRT86O43790 486 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 CST8O60676 142 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 MAP3K6O95382 1288 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 KRT10P13645 584 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 HNRNPA2B1P22626 353 aaKnown RBP10.79□□□□□ -0.68
LINC00239-201ENST00000556973 CETN2P41208 172 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 ABL2P42684 1182 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 PEX5P50542 639 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 RWDD2BP57060 319 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 C21orf59P57076 290 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 PPIDQ08752 370 aaKnown RBP10.79□□□□□ -0.68
LINC00239-201ENST00000556973 ITKQ08881 620 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 ELP6Q0PNE2 266 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 OVGP1Q12889 678 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 GRIK2Q13002 908 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 SGCGQ13326 291 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 PDK1Q15118 436 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 NAPEPLDQ6IQ20 393 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 NT5DC3Q86UY8 548 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 IQCHQ86VS3 1027 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 CCDC50Q8IVM0 306 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 MINDY1Q8N5J2 469 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 MFSD2AQ8NA29 543 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 FAM174AQ8TBP5 190 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 ASB12Q8WXK4 309 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 KRT35Q92764 455 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 P3H4Q92791 437 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 ECHDC3Q96DC8 303 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 SLC6A18Q96N87 628 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 LGMNQ99538 433 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms