RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 WNT1P04628 370 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 CD48P09326 243 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 IL4RP24394 825 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 CYLC1P35663 651 aaPredicted RBP11.68□□□□□ -0.54
SLIRP-205ENST00000556310 ABL2P42684 1182 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 CTSKP43235 329 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 NOVA1P51513 510 aaKnown RBP11.68□□□□□ -0.54
SLIRP-205ENST00000556310 C21orf59P57076 290 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 GRM3Q14832 879 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 ZNF284Q2VY69 593 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 HLA-BQ31612 363 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 ATP13A4Q4VNC1 1196 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 TMEM259Q4ZIN3 620 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 SLC45A4Q5BKX6 768 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 KIAA1161Q6NSJ0 714 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 GDPD4Q6W3E5 623 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 PIP4P1Q86T03 277 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 MAP7D3Q8IWC1 876 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 TP53INP2Q8IXH6 220 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 FAF2Q96CS3 445 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 KLHL32Q96NJ5 620 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 ANP32EQ9BTT0 268 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 CALN1Q9BXU9 219 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 LUC7LQ9NQ29 371 aaKnown RBP11.68□□□□□ -0.54
SLIRP-205ENST00000556310 KLHL11Q9NVR0 708 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 DKK3Q9UBP4 350 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 SEPT3Q9UH03 358 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 FNDC3AQ9Y2H6 1198 aaKnown RBP11.68□□□□□ -0.54
SLIRP-205ENST00000556310 SNX11Q9Y5W9 270 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 LRRK1Q38SD2 2015 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 TSPAN11A1L157 253 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 WNT9AO14904 365 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 INSIG1O15503 277 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 SPINT1O43278 529 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 TSPAN6O43657 245 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 MFSD11O43934 449 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 PCDH8O95206 1070 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 CEACAM1P13688 526 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 CD59P13987 128 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 MAGEA1P43355 309 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 RGRP47804 291 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 CSNK1DP48730 415 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 HADHBP55084 474 aaKnown RBP11.67□□□□□ -0.54
SLIRP-205ENST00000556310 RPS21P63220 83 aaKnown RBP11.67□□□□□ -0.54
SLIRP-205ENST00000556310 OVGP1Q12889 678 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 MMRN1Q13201 1228 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 LBRQ14739 615 aaKnown RBP11.67□□□□□ -0.54
SLIRP-205ENST00000556310 PAFAH1B3Q15102 231 aaKnown RBP11.67□□□□□ -0.54
SLIRP-205ENST00000556310 SPA17Q15506 151 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 ZNF423Q2M1K9 1284 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 SEL1L3Q68CR1 1132 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 NCBP2-AS2Q69YL0 99 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 PSAPL1Q6NUJ1 521 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 IQCHQ86VS3 1027 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 VSIG1Q86XK7 387 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 LRRC49Q8IUZ0 686 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 MFSD2AQ8NA29 543 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 TMEM145Q8NBT3 493 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 KCTD6Q8NC69 237 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 TSEN2Q8NCE0 465 aaKnown RBP11.67□□□□□ -0.54
SLIRP-205ENST00000556310 DEFB124Q8NES8 71 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 PCDH19Q8TAB3 1148 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 PSKH2Q96QS6 385 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 TUBGCP5Q96RT8 1024 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 SLC32A1Q9H598 525 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 IL21RQ9HBE5 538 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 ZFR2Q9UPR6 939 aaKnown RBP11.67□□□□□ -0.54
SLIRP-205ENST00000556310 PCDHGB2Q9Y5G2 931 aa11.67□□□□□ -0.54
SLIRP-205ENST00000556310 CEP295Q9C0D2 2601 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 ZNF487B1APH4 448 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 AREL1O15033 823 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 SLC31A1O15431 190 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 DFNA5O60443 496 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 MAFKO60675 156 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 MAGEC1O60732 1142 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 PIGNO95427 931 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 PEX11BO96011 259 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 ADRB1P08588 477 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 PRLRP16471 622 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 HNRNPA2B1P22626 353 aaKnown RBP11.66□□□□□ -0.54
SLIRP-205ENST00000556310 SERPINA4P29622 427 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 CDC25BP30305 580 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 AKT2P31751 481 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 HSPA9P38646 679 aaKnown RBP11.66□□□□□ -0.54
SLIRP-205ENST00000556310 SLC1A1P43005 524 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 CCT8P50990 548 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 RENBPP51606 427 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 SUOXP51687 545 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 NXPH1P58417 271 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 AP1S1P61966 158 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 NSUN2Q08J23 767 aaKnown RBP eCLIP11.66□□□□□ -0.54
SLIRP-205ENST00000556310 GALNT2Q10471 571 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 ZNF235Q14590 738 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 ANKRD20A8PQ5CZ79 823 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 ZFYVE27Q5T4F4 411 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 LRRC38Q5VT99 294 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 SRLQ86TD4 932 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 TMTC1Q8IUR5 882 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 NAXDQ8IW45 347 aa11.66□□□□□ -0.54
SLIRP-205ENST00000556310 HCAR2Q8TDS4 363 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms