RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 HDCP19113 662 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 ETFBP38117 255 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 SLC1A2P43004 574 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 PLK1P53350 603 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 OXCT1P55809 520 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 USP4Q13107 963 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 DBN1Q16643 649 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 INSCQ1MX18 579 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 LGSNQ5TDP6 509 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 FAM109BQ6ICB4 259 aaPredicted RBP8.99□□□□□ -0.97
TDP1-210ENST00000554976 NCEH1Q6PIU2 408 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 STRA8Q7Z7C7 330 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.99□□□□□ -0.97
TDP1-210ENST00000554976 MAB21L3Q8N8X9 362 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 ZNF707Q96C28 371 aaPredicted RBP8.99□□□□□ -0.97
TDP1-210ENST00000554976 TCEAL4Q96EI5 215 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 FSD1LQ9BXM9 530 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 TDRD1Q9BXT4 1180 aaKnown RBP8.99□□□□□ -0.97
TDP1-210ENST00000554976 PRKD2Q9BZL6 878 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 NACA2Q9H009 215 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 ATXN3LQ9H3M9 355 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 NOD2Q9HC29 1040 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 TRPC7Q9HCX4 862 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 SLCO1B3Q9NPD5 702 aa8.99□□□□□ -0.97
TDP1-210ENST00000554976 C20orf96Q9NUD7 363 aaPredicted RBP8.99□□□□□ -0.97
TDP1-210ENST00000554976 UBA2Q9UBT2 640 aaPredicted RBP8.99□□□□□ -0.97
TDP1-210ENST00000554976 HEATR9A2RTY3 570 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 AHSGP02765 367 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 PROCP04070 461 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 SBK3P0C264 359 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 GJA1P17302 382 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 DDX6P26196 483 aaKnown RBP eCLIP8.98□□□□□ -0.97
TDP1-210ENST00000554976 GMPRP36959 345 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 CSKP41240 450 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 PCSK7Q16549 785 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 LACTB2Q53H82 288 aaPredicted RBP8.98□□□□□ -0.97
TDP1-210ENST00000554976 INO80DQ53TQ3 878 aaPredicted RBP8.98□□□□□ -0.97
TDP1-210ENST00000554976 OTOAQ7RTW8 1153 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 TMC7Q7Z402 723 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 RAB3IL1Q8TBN0 382 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 MAN1C1Q9NR34 630 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 IARS2Q9NSE4 1012 aaKnown RBP8.98□□□□□ -0.97
TDP1-210ENST00000554976 PCMTD2Q9NV79 361 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 SEPT3Q9UH03 358 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 LAMA2P24043 3122 aaKnown RBP8.98□□□□□ -0.97
TDP1-210ENST00000554976 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.98□□□□□ -0.97
TDP1-210ENST00000554976 COPEO14579 308 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 BIRC5O15392 142 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 SNAP91O60641 907 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 PENKP01210 267 aaPredicted RBP8.98□□□□□ -0.97
TDP1-210ENST00000554976 FGF1P05230 155 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 RB1P06400 928 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 HLA-DPA1P20036 260 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 LEPRP48357 1165 aaKnown RBP8.98□□□□□ -0.97
TDP1-210ENST00000554976 SERPINB4P48594 390 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 ZNF140P52738 457 aaPredicted RBP8.98□□□□□ -0.97
TDP1-210ENST00000554976 IRX1P78414 480 aaPredicted RBP8.98□□□□□ -0.97
TDP1-210ENST00000554976 TIAL1Q01085 375 aaKnown RBP eCLIP8.98□□□□□ -0.97
TDP1-210ENST00000554976 CDK18Q07002 472 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 ZNF177Q13360 481 aaPredicted RBP8.98□□□□□ -0.97
TDP1-210ENST00000554976 GRM3Q14832 879 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 PCLAFQ15004 111 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 ZNF77Q15935 545 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 GALNTL6Q49A17 601 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 C9orf50Q5SZB4 431 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 GKAP1Q5VSY0 366 aaPredicted RBP8.98□□□□□ -0.97
TDP1-210ENST00000554976 KYAT3Q6YP21 454 aaKnown RBP8.98□□□□□ -0.97
TDP1-210ENST00000554976 KIAA0907Q7Z7F0 614 aaPredicted RBP8.98□□□□□ -0.97
TDP1-210ENST00000554976 DENND6AQ8IWF6 608 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 APCDD1Q8J025 514 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 PLD6Q8N2A8 252 aaKnown RBP8.98□□□□□ -0.97
TDP1-210ENST00000554976 DCAF4L2Q8NA75 395 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 GPR150Q8NGU9 434 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 C10orf82Q8WW14 230 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 RHOJQ9H4E5 214 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 KCNK13Q9HB14 408 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 NSMCE4AQ9NXX6 385 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 PHTF1Q9UMS5 762 aa8.98□□□□□ -0.97
TDP1-210ENST00000554976 TRAV19A0A0A6YYK7 116 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 TARM1B6A8C7 271 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 H0YHG0 523 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 INSIG1O15503 277 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 RFPL2O75678 378 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 TMCC1O94876 653 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 FGF19O95750 216 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 EPCAMP16422 314 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 POLD2P49005 469 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 SERPINB8P50452 374 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 ARSDP51689 593 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 MPP1Q00013 466 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 IRF9Q00978 393 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 PPM1JQ5JR12 505 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 MBLAC2Q68D91 279 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 CPLX4Q7Z7G2 160 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 CMTM8Q8IZV2 173 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 NDUFAF2Q8N183 169 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 FIBINQ8TAL6 211 aa8.97□□□□□ -0.97
TDP1-210ENST00000554976 MRPS31Q92665 395 aaKnown RBP8.97□□□□□ -0.97
TDP1-210ENST00000554976 USP13Q92995 863 aaPredicted RBP8.97□□□□□ -0.97
TDP1-210ENST00000554976 VPS39Q96JC1 886 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms