RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ABCB10Q9NRK6 738 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 PACSIN3Q9UKS6 424 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 LYPLA1O75608 230 aaPredicted RBP14.06□□□□□ -0.16
VTI1B-204ENST00000554659 WARSP23381 471 aaKnown RBP14.06□□□□□ -0.16
VTI1B-204ENST00000554659 CLK2P49760 499 aaKnown RBP14.06□□□□□ -0.16
VTI1B-204ENST00000554659 PSEN2P49810 448 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 DPYSQ14117 519 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 FAM171A1Q5VUB5 890 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 PIGZQ86VD9 579 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 S100ZQ8WXG8 99 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 MECRQ9BV79 373 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 LHX5Q9H2C1 402 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 GNPTGQ9UJJ9 305 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 RPN2P04844 631 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 CKBP12277 381 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 HGFP14210 728 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 VAV1P15498 845 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 CRHR1P34998 444 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 TTPAP49638 278 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 INSCQ1MX18 579 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 MZT2BQ6NZ67 158 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 PQLC1Q8N2U9 271 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 POC5Q8NA72 575 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 MYDGFQ969H8 173 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 MARCH2Q9P0N8 246 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 GSTK1Q9Y2Q3 226 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 PLLPQ9Y342 182 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 RWDD3Q9Y3V2 267 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 GMPPBQ9Y5P6 360 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 COL5A2P05997 1499 aaPredicted RBP14.06□□□□□ -0.16
VTI1B-204ENST00000554659 H7C0S8 307 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 NDUFB5O43674 189 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 IDO1P14902 403 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 IDH2P48735 452 aaKnown RBP14.05□□□□□ -0.16
VTI1B-204ENST00000554659 OLFML1Q6UWY5 402 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 COMMD2Q86X83 199 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 ADCY4Q8NFM4 1077 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 KBTBD8Q8NFY9 601 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 DGCR14Q96DF8 476 aaKnown RBP14.05□□□□□ -0.16
VTI1B-204ENST00000554659 OSGEPL1Q9H4B0 414 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 VPS51Q9UID3 782 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 PSMD13Q9UNM6 376 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 BBIP1A8MTZ0 92 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 TNFSF9P41273 254 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 AIF1P55008 147 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 PRKG2Q13237 762 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 NOMO1Q15155 1222 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 WSCD1Q658N2 575 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 SLC25A24Q6NUK1 477 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 SPESP1Q6UW49 350 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 TNS4Q8IZW8 715 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 GSTCDQ8NEC7 633 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 TRMOQ9BU70 441 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 ADCY6O43306 1168 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 HOXB6P17509 224 aaKnown RBP14.05□□□□□ -0.16
VTI1B-204ENST00000554659 ADORA2AP29274 412 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 ATP6V0D1P61421 351 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 POLR2LP62875 67 aaKnown RBP14.05□□□□□ -0.16
VTI1B-204ENST00000554659 PTSQ03393 145 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 CYP2A13Q16696 494 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 SLC5A9Q2M3M2 681 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 NDUFAF6Q330K2 333 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 RFX4Q33E94 735 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 ATG14Q6ZNE5 492 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 GATAD2AQ86YP4 633 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 RIOX2Q8IUF8 465 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 CLYBLQ8N0X4 340 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 MAGEB10Q96LZ2 347 aaPredicted RBP14.05□□□□□ -0.16
VTI1B-204ENST00000554659 C7orf26Q96N11 449 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 PGLYRP2Q96PD5 576 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 OMDQ99983 421 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 S100A14Q9HCY8 104 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 CMTM6Q9NX76 183 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 UXTQ9UBK9 157 aaPredicted RBP14.05□□□□□ -0.16
VTI1B-204ENST00000554659 PRKAG3Q9UGI9 489 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 CORO2BQ9UQ03 480 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 TBC1D30Q9Y2I9 924 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 HBS1LQ9Y450 684 aaKnown RBP14.05□□□□□ -0.16
VTI1B-204ENST00000554659 SLC28A1O00337 649 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 AVILO75366 819 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 TSPAN9O75954 239 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 NOL4O94818 638 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 SEC24AO95486 1093 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 MATKP42679 507 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 TUFMP49411 452 aaKnown RBP14.05□□□□□ -0.16
VTI1B-204ENST00000554659 LSM3P62310 102 aaKnown RBP14.05□□□□□ -0.16
VTI1B-204ENST00000554659 PUDPQ08623 228 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 ZIK1Q3SY52 487 aaPredicted RBP14.05□□□□□ -0.16
VTI1B-204ENST00000554659 TMEM63BQ5T3F8 832 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 RNASE11Q8TAA1 199 aaKnown RBP14.05□□□□□ -0.16
VTI1B-204ENST00000554659 AKT1S1Q96B36 256 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 KREMEN1Q96MU8 473 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 QRFPRQ96P65 431 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 LGMNQ99538 433 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 TINF2Q9BSI4 451 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 TMEM106CQ9BVX2 250 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 C8orf4Q9NR00 106 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 PNPOQ9NVS9 261 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 PIAS1O75925 651 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 SERPINA4P29622 427 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms