RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 C1orf220Q5T0J3 134 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 ATG16L1Q676U5 607 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 AAGABQ6PD74 315 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 C4orf50Q6ZRC1 276 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 C15orf39Q6ZRI6 1047 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 LCNL1Q6ZST4 164 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 TSHZ1Q6ZSZ6 1077 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 FAM43BQ6ZT52 329 aaPredicted RBP6.07□□□□□ -1.44
VPS33B-203ENST00000554264 MON1BQ7L1V2 547 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 NLRP9Q7RTR0 991 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 ASCL5Q7RTU5 278 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 CLNKQ7Z7G1 428 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 ADGRD2Q7Z7M1 963 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 B3GNT8Q7Z7M8 397 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 ADGRG6Q86SQ4 1221 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 LONP2Q86WA8 852 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 LRRC56Q8IYG6 542 aaPredicted RBP6.07□□□□□ -1.44
VPS33B-203ENST00000554264 THNSL1Q8IYQ7 743 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 ZDHHC14Q8IZN3 488 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 DAW1Q8N136 415 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.07□□□□□ -1.44
VPS33B-203ENST00000554264 GDAP1Q8TB36 358 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 FEZF2Q8TBJ5 459 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 FNIP1Q8TF40 1166 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 POF1BQ8WVV4 589 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 C1orf54Q8WWF1 131 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 SUSD6Q92537 303 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 MTBPQ96DY7 904 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 NSL1Q96IY1 281 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 CDHR1Q96JP9 859 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 RIPOR3Q96MK2 946 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 OLFM3Q96PB7 478 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 CYTH2Q99418 400 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 GPR20Q99678 358 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 TBC1D10AQ9BXI6 508 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 FTHL17Q9BXU8 183 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 IMPG2Q9BZV3 1241 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 MIS12Q9H081 205 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 C1orf21Q9H246 121 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 SUDS3Q9H7L9 328 aaPredicted RBP6.07□□□□□ -1.44
VPS33B-203ENST00000554264 SAYSD1Q9NPB0 183 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 WDR35Q9P2L0 1181 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 BARX2Q9UMQ3 279 aaPredicted RBP6.07□□□□□ -1.44
VPS33B-203ENST00000554264 WASF3Q9UPY6 502 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 CHKBQ9Y259 395 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 MRPL42Q9Y6G3 142 aaKnown RBP6.07□□□□□ -1.44
VPS33B-203ENST00000554264 SQORQ9Y6N5 450 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 WDFY4Q6ZS81 3184 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 WDR81Q562E7 1941 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 KIAA1217Q5T5P2 1943 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 CFAP69A5D8W1 941 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 FAM47E-STBD1D6RA91 191 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 I3L4J1 428 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 GYG2O15488 501 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 CHMP2AO43633 222 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 EXTL3O43909 919 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 SMIM24O75264 130 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 PIGRP01833 764 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 AMY2AP04746 511 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 CKMP06732 381 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 RALAP11233 206 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 MYL4P12829 197 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 AMY2BP19961 511 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 RRM1P23921 792 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 DNAJB1P25685 340 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 CNTFP26441 200 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 ADSSP30520 456 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 HOXA13P31271 388 aaPredicted RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 YWHABP31946 246 aaKnown RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 FOXN2P32314 431 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 ID4P47928 161 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 KCNJ1P48048 391 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 PTDSS1P48651 473 aaKnown RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 PAPOLAP51003 745 aaKnown RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 ARSEP51690 589 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 ARFIP2P53365 341 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 AP2B1P63010 937 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 CDK16Q00536 496 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 MGAT3Q09327 533 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 AP1B1Q10567 949 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 DNAJC3Q13217 504 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 LPIN1Q14693 890 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 HADHQ16836 314 aaKnown RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 ZACNQ401N2 412 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 FBXO47Q5MNV8 452 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 SH2D4BQ5SQS7 431 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 STXBP5Q5T5C0 1151 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 LCE3BQ5TA77 95 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 RNASEH2BQ5TBB1 312 aaKnown RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 CGB2Q6NT52 195 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 ABHD17CQ6PCB6 329 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 NET1Q7Z628 596 aaPredicted RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 RBM23Q86U06 439 aaKnown RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 MTDHQ86UE4 582 aaKnown RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 TMPRSS6Q8IU80 811 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 UBALD2Q8IYN6 164 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 PDIK1LQ8N165 341 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 VPS52Q8N1B4 723 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 KIF2BQ8N4N8 673 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 TMEM161BQ8NDZ6 487 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms