RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ZNF641Q96N77 438 aaPredicted RBP18.69■□□□□ 0.58
PRPF40B-216ENST00000552301 SLC6A18Q96N87 628 aa18.69■□□□□ 0.58
PRPF40B-216ENST00000552301 TSGA10Q9BZW7 698 aa18.69■□□□□ 0.58
PRPF40B-216ENST00000552301 SUV39H2Q9H5I1 410 aa18.69■□□□□ 0.58
PRPF40B-216ENST00000552301 SCUBE2Q9NQ36 999 aa18.69■□□□□ 0.58
PRPF40B-216ENST00000552301 DTLQ9NZJ0 730 aa18.69■□□□□ 0.58
PRPF40B-216ENST00000552301 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 C4orf47A7E2U8 309 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 SLC30A4O14863 429 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 PPP1R12AO14974 1030 aaPredicted RBP18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 TSPAN6O43657 245 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 AP1G1O43747 822 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 CCNCP24863 283 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 ABL2P42684 1182 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 CDKN2BP42772 138 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 MARCKSL1P49006 195 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 CSNK1EP49674 416 aaKnown RBP18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 C21orf59P57076 290 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 RPS21P63220 83 aaKnown RBP18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 ITKQ08881 620 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 HNRNPDQ14103 355 aaKnown RBP18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 PUM1Q14671 1186 aaKnown RBP eCLIP18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 PDK1Q15118 436 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 UAP1L1Q3KQV9 507 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 KAZNQ674X7 775 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 BRAT1Q6PJG6 821 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 SPOCD1Q6ZMY3 1216 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 ZSCAN30Q86W11 494 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 CAMK1DQ8IU85 385 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 CCDC13Q8IYE1 715 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 RCOR2Q8IZ40 523 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 PLD5Q8N7P1 536 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 EXD1Q8NHP7 514 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 C1orf216Q8TAB5 229 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 HDAC11Q96DB2 347 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 RMDN1Q96DB5 314 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 RTKNQ9BST9 563 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 NT5MQ9NPB1 228 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 TTLL3Q9Y4R7 772 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 FADS3Q9Y5Q0 445 aa18.68■□□□□ 0.58
PRPF40B-216ENST00000552301 A0A1B0GVT2 93 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 CCDC66A2RUB6 948 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 GRID2IPA4D2P6 1211 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 MUSKO15146 869 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 SLC31A1O15431 190 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 KRT86O43790 486 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 CER1O95813 267 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 PEX11BO96011 259 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 CTNNA1P35221 906 aaKnown RBP18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 CETN2P41208 172 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 SUOXP51687 545 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 ELP6Q0PNE2 266 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 TFDP3Q5H9I0 405 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 LRRC73Q5JTD7 316 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 IL27RAQ6UWB1 636 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 BZW1Q7L1Q6 419 aaKnown RBP18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 PEX26Q7Z412 305 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 MINDY1Q8N5J2 469 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 HCAR2Q8TDS4 363 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 KRT35Q92764 455 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 KLK6Q92876 244 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 TSGA13Q96PP4 275 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 NUDCD1Q96RS6 583 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 MGME1Q9BQP7 344 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 ORAI3Q9BRQ5 295 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 TRIM10Q9UDY6 481 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 AMFRQ9UKV5 643 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 ADGRG1Q9Y653 693 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 SLCO1B1Q9Y6L6 691 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 TRPM6Q9BX84 2022 aa18.67■□□□□ 0.58
PRPF40B-216ENST00000552301 UPK3BL1B0FP48 263 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 UPK3BL2E5RIL1 263 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 PRAMEF26H0Y7S4 382 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 MATN3O15232 486 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 CST8O60676 142 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 OPHN1O60890 802 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 PRLRP16471 622 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 TGM2P21980 687 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 CD38P28907 300 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 AKT2P31751 481 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 MAXP61244 160 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 AP1B1Q10567 949 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 SLC10A2Q12908 348 aaPredicted RBP18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 STAT4Q14765 748 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 LLGL1Q15334 1064 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 RALGPS1Q5JS13 557 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 CCDC181Q5TID7 509 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 SEL1L3Q68CR1 1132 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 ERAP2Q6P179 960 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 LAYNQ6UX15 382 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 LRRC8AQ8IWT6 810 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 CXorf40AQ8TE69 158 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 FATE1Q969F0 183 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 MYOCQ99972 504 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 POLR1EQ9GZS1 481 aaKnown RBP18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 EBF2Q9HAK2 575 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 RBM22Q9NW64 420 aaKnown RBP eCLIP18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 ITM2BQ9Y287 266 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 PLXNA2O75051 1894 aa18.66■□□□□ 0.58
PRPF40B-216ENST00000552301 ADAMTS9Q9P2N4 1935 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms