RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 VPS51Q9UID3 782 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 RPL26L1Q9UNX3 145 aaKnown RBP12.71□□□□□ -0.37
CACNB3-217ENST00000550483 CHD5Q8TDI0 1954 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 ZCWPW2A0A1B0GU75 182 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 TM9SF1O15321 606 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 TIMM44O43615 452 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 ZWINTO95229 277 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 ADH1CP00326 375 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 CEBPBP17676 345 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 FSHRP23945 695 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 SPRP35270 261 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-217ENST00000550483 VASPP50552 380 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-217ENST00000550483 MAXP61244 160 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 RHOAP61586 193 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 GNGT1P63211 74 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 LMAN2Q12907 356 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 MTM1Q13496 603 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 CYTH1Q15438 398 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 SKIDA1Q1XH10 827 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 CERCAMQ5T4B2 595 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 KIAA0408Q6ZU52 694 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 GALNT7Q86SF2 657 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 CNTN4Q8IWV2 1026 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 OR52K2Q8NGK3 314 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 WFIKKN2Q8TEU8 576 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 GDPD5Q8WTR4 605 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 CABS1Q96KC9 395 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 BBS2Q9BXC9 721 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 CCDC134Q9H6E4 229 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 PLAC1Q9HBJ0 212 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 THG1LQ9NWX6 298 aaKnown RBP12.7□□□□□ -0.38
CACNB3-217ENST00000550483 CTNNAL1Q9UBT7 734 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 TRIOO75962 3097 aa12.7□□□□□ -0.38
CACNB3-217ENST00000550483 TMEM120BA0PK00 339 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 HOXC11O43248 304 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-217ENST00000550483 SOCS5O75159 536 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 SIN3BO75182 1162 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 PRAMEF12O95522 483 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 NFATC1O95644 943 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 CRTAMO95727 393 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 IGSF6O95976 241 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 ATXN1LP0C7T5 689 aaKnown RBP12.69□□□□□ -0.38
CACNB3-217ENST00000550483 MZF1P28698 734 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-217ENST00000550483 ATP1A2P50993 1020 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 EFTUD2Q15029 972 aaKnown RBP eCLIP12.69□□□□□ -0.38
CACNB3-217ENST00000550483 PDGFRLQ15198 375 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 PCSK7Q16549 785 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 FSCBQ5H9T9 825 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 LEKR1Q6ZMV7 388 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 TPGS1Q6ZTW0 290 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 KCNMB4Q86W47 210 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 PLPP6Q8IY26 295 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 CYP4X1Q8N118 509 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 AHI1Q8N157 1196 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 BRSK1Q8TDC3 778 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 BPIFB1Q8TDL5 484 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 MZB1Q8WU39 189 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 OSCP1Q8WVF1 389 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 SMARCD2Q92925 531 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 APOL2Q9BQE5 337 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 TDRD1Q9BXT4 1180 aaKnown RBP12.69□□□□□ -0.38
CACNB3-217ENST00000550483 CERS4Q9HA82 394 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 CHRAC1Q9NRG0 131 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 SLC25A13Q9UJS0 675 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 SLC8A2Q9UPR5 921 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 CCL26Q9Y258 94 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 HS3ST2Q9Y278 367 aa12.69□□□□□ -0.38
CACNB3-217ENST00000550483 SLC7A4O43246 635 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 GSRP00390 522 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 ASLP04424 464 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 PABPC1P11940 636 aaKnown RBP12.68□□□□□ -0.38
CACNB3-217ENST00000550483 CHN1P15882 459 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 SCNN1BP51168 640 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 GYS2P54840 703 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 SNRPD1P62314 119 aaKnown RBP12.68□□□□□ -0.38
CACNB3-217ENST00000550483 NTHL1P78549 312 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 CRADDP78560 199 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 IL9RQ01113 521 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 SLC18A2Q05940 514 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 RAD51Q06609 339 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 THOC5Q13769 683 aaKnown RBP12.68□□□□□ -0.38
CACNB3-217ENST00000550483 POU6F1Q14863 301 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 E2F5Q15329 346 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 SEPT7Q16181 437 aaKnown RBP12.68□□□□□ -0.38
CACNB3-217ENST00000550483 PITRM1Q5JRX3 1037 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 SIRPB2Q5JXA9 342 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 TSTD2Q5T7W7 516 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 CES5AQ6NT32 575 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 ANKRD54Q6NXT1 300 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 TRMT10BQ6PF06 316 aaKnown RBP12.68□□□□□ -0.38
CACNB3-217ENST00000550483 NCEH1Q6PIU2 408 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 TMC5Q6UXY8 1006 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 PACS1Q6VY07 963 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 SRLQ86TD4 932 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 LCA5Q86VQ0 697 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 NDUFAF2Q8N183 169 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 PCDH20Q8N6Y1 951 aaKnown RBP12.68□□□□□ -0.38
CACNB3-217ENST00000550483 ATP2A3Q93084 1043 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 APOPT1Q96IL0 206 aa12.68□□□□□ -0.38
CACNB3-217ENST00000550483 LMLNQ96KR4 655 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms