RNA–Protein interactions for RNA: ENST00000550168.5

CACNB3-214, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 677 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-214ENST00000550168 SPHK2Q9NRA0 654 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 UBP1Q9NZI7 540 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 CACNA1HO95180 2353 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 DENND4CQ5VZ89 1909 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 HELZP42694 1942 aaKnown RBP12.71□□□□□ -0.37
CACNB3-214ENST00000550168 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-214ENST00000550168 A0A1W2PQ67 120 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 FAM47DPA6NHR8 397 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 ATP9BO43861 1147 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 USP12O75317 370 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 TMCC1O94876 653 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 CSPG5O95196 566 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 MT-ND3P03897 115 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 MMP2P08253 660 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 GP5P40197 560 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 POLD2P49005 469 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 CSE1LP55060 971 aaKnown RBP12.71□□□□□ -0.37
CACNB3-214ENST00000550168 RPL26P61254 145 aaKnown RBP12.71□□□□□ -0.37
CACNB3-214ENST00000550168 ARF5P84085 180 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 PDE1BQ01064 536 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 DSC2Q02487 901 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 NIPAL4Q0D2K0 466 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 GRM3Q14832 879 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 PLEKHG6Q3KR16 790 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 GRTP1Q5TC63 336 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 KIAA0930Q6ICG6 404 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-214ENST00000550168 TIFABQ6ZNK6 161 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 SPRED2Q7Z698 418 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 GPR149Q86SP6 731 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 RBM23Q86U06 439 aaKnown RBP12.71□□□□□ -0.37
CACNB3-214ENST00000550168 RASSF3Q86WH2 238 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 ARID3BQ8IVW6 561 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-214ENST00000550168 SRRM1Q8IYB3 904 aaKnown RBP12.71□□□□□ -0.37
CACNB3-214ENST00000550168 PGBD5Q8N414 524 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 EFHBQ8N7U6 833 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.71□□□□□ -0.37
CACNB3-214ENST00000550168 ACMSDQ8TDX5 336 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 IRF7Q92985 503 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 ISG20Q96AZ6 181 aaKnown RBP12.71□□□□□ -0.37
CACNB3-214ENST00000550168 C19orf43Q9BQ61 176 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 SELENOSQ9BQE4 189 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 FAM167BQ9BTA0 163 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 CEP44Q9C0F1 390 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 TRABDQ9H4I3 376 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 TRPV4Q9HBA0 871 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 PPANQ9NQ55 473 aaKnown RBP12.71□□□□□ -0.37
CACNB3-214ENST00000550168 ABCB8Q9NUT2 735 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 INTS9Q9NV88 658 aaKnown RBP12.71□□□□□ -0.37
CACNB3-214ENST00000550168 MKS1Q9NXB0 559 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 HACD3Q9P035 362 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 TBK1Q9UHD2 729 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 VPS51Q9UID3 782 aa12.71□□□□□ -0.37
CACNB3-214ENST00000550168 RPL26L1Q9UNX3 145 aaKnown RBP12.71□□□□□ -0.37
CACNB3-214ENST00000550168 USP24Q9UPU5 2620 aa12.71□□□□□ -0.38
CACNB3-214ENST00000550168 CHD5Q8TDI0 1954 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 ZCWPW2A0A1B0GU75 182 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 TM9SF1O15321 606 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 TIMM44O43615 452 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 ZWINTO95229 277 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 ADH1CP00326 375 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 CEBPBP17676 345 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 FSHRP23945 695 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 SPRP35270 261 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-214ENST00000550168 VASPP50552 380 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-214ENST00000550168 MAXP61244 160 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 RHOAP61586 193 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 GNGT1P63211 74 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 LMAN2Q12907 356 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 MTM1Q13496 603 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 CYTH1Q15438 398 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 SKIV2LQ15477 1246 aaKnown RBP12.7□□□□□ -0.38
CACNB3-214ENST00000550168 ST3GAL2Q16842 350 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 SKIDA1Q1XH10 827 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 CERCAMQ5T4B2 595 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 KIAA0408Q6ZU52 694 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 GALNT7Q86SF2 657 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 CNTN4Q8IWV2 1026 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 OR52K2Q8NGK3 314 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 WFIKKN2Q8TEU8 576 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 GDPD5Q8WTR4 605 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 CABS1Q96KC9 395 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 BBS2Q9BXC9 721 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 CCDC134Q9H6E4 229 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 PLAC1Q9HBJ0 212 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 THG1LQ9NWX6 298 aaKnown RBP12.7□□□□□ -0.38
CACNB3-214ENST00000550168 CTNNAL1Q9UBT7 734 aa12.7□□□□□ -0.38
CACNB3-214ENST00000550168 RALYQ9UKM9 306 aaKnown RBP12.7□□□□□ -0.38
CACNB3-214ENST00000550168 TMEM120BA0PK00 339 aa12.69□□□□□ -0.38
CACNB3-214ENST00000550168 HOXC11O43248 304 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-214ENST00000550168 SOCS5O75159 536 aa12.69□□□□□ -0.38
CACNB3-214ENST00000550168 SIN3BO75182 1162 aa12.69□□□□□ -0.38
CACNB3-214ENST00000550168 PRAMEF12O95522 483 aa12.69□□□□□ -0.38
CACNB3-214ENST00000550168 NFATC1O95644 943 aa12.69□□□□□ -0.38
CACNB3-214ENST00000550168 CRTAMO95727 393 aa12.69□□□□□ -0.38
CACNB3-214ENST00000550168 IGSF6O95976 241 aa12.69□□□□□ -0.38
CACNB3-214ENST00000550168 ATXN1LP0C7T5 689 aaKnown RBP12.69□□□□□ -0.38
CACNB3-214ENST00000550168 MZF1P28698 734 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-214ENST00000550168 ATP1A2P50993 1020 aa12.69□□□□□ -0.38
CACNB3-214ENST00000550168 EFTUD2Q15029 972 aaKnown RBP eCLIP12.69□□□□□ -0.38
CACNB3-214ENST00000550168 PDGFRLQ15198 375 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms